RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 TMEM47Q9BQJ4 181 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 KDM4CQ9H3R0 1056 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 ZDHHC9Q9Y397 364 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 METP08581 1390 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 NEMP1O14524 444 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 CAPRIN2Q6IMN6 1127 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 FAM47EQ6ZV65 393 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 SLC26A7Q8TE54 656 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 INTS2Q9H0H0 1204 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 RAVER2Q9HCJ3 691 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 GTPBP10A4D1E9 387 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 H7C1W4 665 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 CHGBP05060 677 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 P4HBP07237 508 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 ANO5Q75V66 913 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 PIGBQ92521 554 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 GRAMD1AQ96CP6 724 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 EPAS1Q99814 870 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 LY9Q9HBG7 655 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 SARS2Q9NP81 518 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 TTC7AQ9ULT0 858 aaPredicted RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 ATF5Q9Y2D1 282 aaPredicted RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 FTLP02792 175 aaPredicted RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 GNL1P36915 607 aaPredicted RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 DHX34Q14147 1143 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 DRAP1Q14919 205 aaPredicted RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 ZC3H12BQ5HYM0 836 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 SNRNP48Q6IEG0 339 aaKnown RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 CYB5R4Q7L1T6 521 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 NUDCD3Q8IVD9 361 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 PPM1NQ8N819 430 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 CEP70Q8NHQ1 597 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 RAPGEF5Q92565 580 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 KIF2CQ99661 725 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 POLR3FQ9H1D9 316 aaPredicted RBP10.09□□□□□ -0.79
TNC-210ENST00000535648 ECT2Q9H8V3 914 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 BARHL2Q9NY43 387 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 SLC9A2Q9UBY0 812 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 ERBB3P21860 1342 aa10.09□□□□□ -0.79
TNC-210ENST00000535648 MEFVO15553 781 aaPredicted RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 CCDC22O60826 627 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 KRT14P02533 472 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 C2orf69Q8N8R5 385 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 CDV3Q9UKY7 258 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 ZNF335Q9H4Z2 1342 aaPredicted RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 APOL1O14791 398 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 FOXP2O15409 715 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 PRAMEP78395 509 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 LBRQ14739 615 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 APOBEC3FQ8IUX4 373 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 HOMEZQ8IX15 550 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 C11orf70Q9BRQ4 267 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 ARFIP2P53365 341 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 NME3Q13232 169 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 PATL1Q86TB9 770 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 TBC1D10CQ8IV04 446 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 CNPY4Q8N129 248 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 EGFL8Q99944 293 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 SPHKAPQ2M3C7 1700 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 PDIA2Q13087 525 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 CCDC137Q6PK04 289 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 GPD1LQ8N335 351 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 CCNYL1Q8N7R7 359 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 EFHBQ8N7U6 833 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 MMP19Q99542 508 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 SRP68Q9UHB9 627 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 ARHGAP26Q9UNA1 814 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 AP3B1O00203 1094 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 DPYSL4O14531 572 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 TRIM66O15016 1216 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 SUGP1Q8IWZ8 645 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 DDX50Q9BQ39 737 aaKnown RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 L2HGDHQ9H9P8 463 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 RNF103-CHMP3A0A140T963 221 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 POTEB3A0JP26 581 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 POTECB2RU33 542 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 H2AFXP16104 143 aaPredicted RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 KRT4P19013 534 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 FAM182BQ5T319 152 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 POTEBQ6S5H4 581 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 CATSPER1Q8NEC5 780 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 NR1H4Q96RI1 486 aaPredicted RBP10.08□□□□□ -0.8
TNC-210ENST00000535648 MTA3Q9BTC8 594 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 GOLPH3LQ9H4A5 285 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 MROH7-TTC4A0A0A0MT08 1334 aa10.08□□□□□ -0.8
TNC-210ENST00000535648 H0Y3Z8 333 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 MRPS25P82663 173 aaKnown RBP10.07□□□□□ -0.8
TNC-210ENST00000535648 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 NFRKBQ6P4R8 1299 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 NYAP1Q6ZVC0 841 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 FRMD5Q7Z6J6 570 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
TNC-210ENST00000535648 CEP95Q96GE4 821 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 SLC13A1Q9BZW2 595 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 ARHGEF9O43307 516 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 COPB2P35606 906 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 PSMC5P62195 406 aa10.07□□□□□ -0.8
TNC-210ENST00000535648 SYDE1Q6ZW31 735 aaPredicted RBP10.07□□□□□ -0.8
TNC-210ENST00000535648 ZBED8Q8IZ13 594 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms