RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SOD2P04179 222 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 GLUD2P49448 558 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 MRE11P49959 708 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 NUBP1P53384 320 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 NHLH1Q02575 133 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 ORC2Q13416 577 aaPredicted RBP14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 KCNC3Q14003 757 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 PPP2R5AQ15172 486 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 SLC27A1Q6PCB7 646 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 TMC5Q6UXY8 1006 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 AUTS2Q8WXX7 1259 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 C8orf76Q96K31 380 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 NACC1Q96RE7 527 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 PRMT7Q9NVM4 692 aaPredicted RBP14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 DNAJB4Q9UDY4 337 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 KIF3AQ9Y496 699 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 IPPQ9Y573 584 aa14.69□□□□□ -0.06
CLSTN3-205ENST00000535452 ATG2AQ2TAZ0 1938 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 ARHGEF35A5YM69 484 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 BTBD18B2RXH4 712 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 TSPAN1O60635 241 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 USO1O60763 962 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 MCM7P33993 719 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 MLH1P40692 756 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 HMGN5P82970 282 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 PTPN14Q15678 1187 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 ME3Q16798 604 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 CYP26C1Q6V0L0 522 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 AGMOQ6ZNB7 445 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 ZDHHC14Q8IZN3 488 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 IFT74Q96LB3 600 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 PRIMPOLQ96LW4 560 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 GAD1Q99259 594 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 NFKBIZQ9BYH8 718 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 POLR3FQ9H1D9 316 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 POMKQ9H5K3 350 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 TUFT1Q9NNX1 390 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 GJB4Q9NTQ9 266 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 FBXL21Q9UKT6 434 aa14.68□□□□□ -0.06
CLSTN3-205ENST00000535452 ARL5CA6NH57 179 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 C2CD4DB7Z1M9 353 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 N4BP3O15049 544 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 TADA2AO75478 443 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 EPCAMP16422 314 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 RARRES1P49788 294 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 MAPK6Q16659 721 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 C15orf39Q6ZRI6 1047 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 MAEAQ7L5Y9 396 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 ZNF280BQ86YH2 543 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 C12orf76Q8N812 135 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 ZNF579Q8NAF0 562 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 NSUN7Q8NE18 718 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 DEPTORQ8TB45 409 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 ATOH1Q92858 354 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 CPB2Q96IY4 423 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 KLHL5Q96PQ7 755 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 HERC2P3Q9BVR0 1158 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 WRAP73Q9P2S5 460 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 LIMCH1Q9UPQ0 1083 aa14.67□□□□□ -0.06
CLSTN3-205ENST00000535452 MEIS3P2A8K0S8 358 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 DDHD2O94830 711 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 NPTXRO95502 500 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 OR52Z1P0C646 297 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 GBP2P32456 591 aaPredicted RBP14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 RBM25P49756 843 aaKnown RBP14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 SCNN1GP51170 649 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 GRIK3Q13003 919 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 USP41Q3LFD5 358 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 PDXDC1Q6P996 788 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 GPR149Q86SP6 731 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 TMEM173Q86WV6 379 aaPredicted RBP14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 PIGOQ8TEQ8 1089 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 ZSCAN31Q96LW9 406 aaPredicted RBP14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 HSD17B14Q9BPX1 270 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 LLPHQ9BRT6 129 aaKnown RBP14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 MINDY3Q9H8M7 445 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 MAN1C1Q9NR34 630 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 LIMD1Q9UGP4 676 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 WDR81Q562E7 1941 aa14.66□□□□□ -0.06
CLSTN3-205ENST00000535452 SF3B1O75533 1304 aaKnown RBP eCLIP14.66□□□□□ -0.063e-9■■■■■ 206.8
CLSTN3-205ENST00000535452 ZMYM2Q9UBW7 1377 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 POTEMA6NI47 508 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 STK25O00506 426 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 CTDNEP1O95476 244 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 CNPP09543 421 aaKnown RBP14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 WEE2P0C1S8 567 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 LIG1P18858 919 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 AVPR2P30518 371 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 HOXA11P31270 313 aaPredicted RBP14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 ARL2P36404 184 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 MBTD1Q05BQ5 628 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 SPIRE1Q08AE8 756 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 ELAVL2Q12926 359 aaKnown RBP14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 PRPF4BQ13523 1007 aaKnown RBP14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 CAPSQ13938 189 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 IFNLR1Q8IU57 520 aaPredicted RBP14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 PLEKHA4Q9H4M7 779 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 PHLPP2Q6ZVD8 1323 aa14.65□□□□□ -0.06
CLSTN3-205ENST00000535452 ARF4P18085 180 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms