RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 DHX15O43143 795 aaKnown RBP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 ZNF623O75123 536 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 ZMYND10O75800 440 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 POMCP01189 267 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 CHRM1P11229 460 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 SDSP20132 328 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 TMOD1P28289 359 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 HNRNPUQ00839 825 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 SATB1Q01826 763 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 DSG1Q02413 1049 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 DRP2Q13474 957 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 STPG1Q5TH74 334 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 PSAPL1Q6NUJ1 521 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 CWC27Q6UX04 472 aaKnown RBP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 AGMOQ6ZNB7 445 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 GLYCTKQ8IVS8 523 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 RNF168Q8IYW5 571 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 FAM160A2Q8N612 972 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 PGBD1Q96JS3 809 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 TMEM175Q9BSA9 504 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 PHF20Q9BVI0 1012 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 SPZ1Q9BXG8 430 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 PLA2G2FQ9BZM2 168 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 LY9Q9HBG7 655 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 SEC63Q9UGP8 760 aaKnown RBP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 SSX2IPQ9Y2D8 614 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 PCDHB15Q9Y5E8 787 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 hCG_1642624A0A1W2PR95 340 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 HOXC13P31276 330 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 CCR3P51677 355 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 FOXC1Q12948 553 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 GAS6Q14393 721 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 SOWAHCQ53LP3 525 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-206ENST00000535290 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
CLIP1-206ENST00000535290 ZNF710Q8N1W2 664 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 URGCPQ8TCY9 931 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 GATA6Q92908 595 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 RILPL2Q969X0 211 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 FAM193BQ96PV7 902 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-206ENST00000535290 DSCC1Q9BVC3 393 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 ARRDC1-AS1Q9H2J1 176 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 LMAN1LQ9HAT1 526 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 CHST7Q9NS84 486 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 CEP131Q9UPN4 1083 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 PIN4Q9Y237 131 aaKnown RBP9.37□□□□□ -0.91
CLIP1-206ENST00000535290 PCDHB2Q9Y5E7 798 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 ASH1LQ9NR48 2969 aaKnown RBP9.37□□□□□ -0.91
CLIP1-206ENST00000535290 NAV2Q8IVL1 2488 aa9.37□□□□□ -0.91
CLIP1-206ENST00000535290 TMEM8BA6NDV4 472 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 AXIN1O15169 862 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 PLEKHA8P1O95397 391 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 C1RP00736 705 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 ZNF806P0C7X5 589 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 SKIP12755 728 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 CXCL12P48061 93 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 PPP2R5DQ14738 602 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 ANKRD45Q5TZF3 282 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 HEATR6Q6AI08 1181 aaKnown RBP9.36□□□□□ -0.91
CLIP1-206ENST00000535290 CATIPQ7Z7H3 387 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 NPAS3Q8IXF0 933 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 COLGALT2Q8IYK4 626 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 SRBD1Q8N5C6 995 aaKnown RBP9.36□□□□□ -0.91
CLIP1-206ENST00000535290 C12orf50Q8NA57 414 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-206ENST00000535290 ZCCHC14Q8WYQ9 949 aaKnown RBP9.36□□□□□ -0.91
CLIP1-206ENST00000535290 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 GCOM2Q9BZD3 368 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-206ENST00000535290 RSAD1Q9HA92 442 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 GABBR1Q9UBS5 961 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 MYH15Q9Y2K3 1946 aa9.36□□□□□ -0.91
CLIP1-206ENST00000535290 DSPP15924 2871 aaKnown RBP9.36□□□□□ -0.91
CLIP1-206ENST00000535290 A0A087WZ62 844 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 FAM86B1E9PN63 330 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 K7ESF4 209 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 CCL16O15467 120 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 ZNF862O60290 1169 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 FAM86B2P0C5J1 330 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 SMARCA1P28370 1054 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 CNR2P34972 360 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 OR1G1P47890 313 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 RAB27AP51159 221 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 NOVA1P51513 510 aaKnown RBP9.35□□□□□ -0.91
CLIP1-206ENST00000535290 CEP68Q76N32 757 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 MRPL10Q7Z7H8 261 aaKnown RBP9.35□□□□□ -0.91
CLIP1-206ENST00000535290 LONP2Q86WA8 852 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 ING5Q8WYH8 240 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 PGBD4Q96DM1 585 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 MBOAT7Q96N66 472 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 FDXACB1Q9BRP7 624 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-206ENST00000535290 GPR62Q9BZJ7 368 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 SMOC1Q9H4F8 434 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 FNIP2Q9P278 1114 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 KANSL3Q9P2N6 904 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 POLIQ9UNA4 740 aa9.35□□□□□ -0.91
CLIP1-206ENST00000535290 ASXL3Q9C0F0 2248 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-206ENST00000535290 ERICH2A1L162 156 aa9.34□□□□□ -0.91
CLIP1-206ENST00000535290 IPO5O00410 1097 aaKnown RBP9.34□□□□□ -0.91
CLIP1-206ENST00000535290 MAN2B1O00754 1011 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms