RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 SH3PXD2AQ5TCZ1 1133 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 HEATR6Q6AI08 1181 aaKnown RBP12.14□□□□□ -0.47
VAMP1-204ENST00000535180 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
VAMP1-204ENST00000535180 EFCAB12Q6NXP0 572 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 C19orf48Q6RUI8 117 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 ITFG1Q8TB96 612 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 ADAM32Q8TC27 787 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 URGCPQ8TCY9 931 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-204ENST00000535180 ZNF668Q96K58 619 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-204ENST00000535180 BBC3Q96PG8 261 aaPredicted RBP12.14□□□□□ -0.47
VAMP1-204ENST00000535180 MXRA8Q9BRK3 442 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 PLA2G2FQ9BZM2 168 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 CHST7Q9NS84 486 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 FAM105AQ9NUU6 356 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 MARCH5Q9NX47 278 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 FNIP2Q9P278 1114 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 KANSL3Q9P2N6 904 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 MSRB2Q9Y3D2 182 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 ASXL3Q9C0F0 2248 aa12.14□□□□□ -0.47
VAMP1-204ENST00000535180 ACACAQ13085 2346 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 EIF4E1BA6NMX2 242 aaKnown RBP12.13□□□□□ -0.47
VAMP1-204ENST00000535180 CCNE2O96020 404 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 HNRNPA1P09651 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
VAMP1-204ENST00000535180 CHRNB1P11230 501 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 RAB27AP51159 221 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 SWSAP1Q6NVH7 229 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 PROSER1Q86XN7 944 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 PIBF1Q8WXW3 757 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 FAM3CQ92520 227 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 MBOAT7Q96N66 472 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 KRT23Q9C075 422 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.13□□□□□ -0.47
VAMP1-204ENST00000535180 CEP131Q9UPN4 1083 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 PCDHGA5Q9Y5G8 931 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
VAMP1-204ENST00000535180 SPDYE3A6NKU9 549 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 C4orf47A7E2U8 309 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 CSDE1O75534 798 aaKnown RBP12.12□□□□□ -0.47
VAMP1-204ENST00000535180 CAPNS1P04632 268 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 MX1P20591 662 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 CSRP1P21291 193 aaKnown RBP12.12□□□□□ -0.47
VAMP1-204ENST00000535180 HOXA6P31267 233 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 KIF5BP33176 963 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 AFF1P51825 1210 aaKnown RBP12.12□□□□□ -0.47
VAMP1-204ENST00000535180 DAB2IPQ5VWQ8 1189 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 CACNA2D4Q7Z3S7 1137 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 TICAM2Q86XR7 235 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 GLYCTKQ8IVS8 523 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 NPAS3Q8IXF0 933 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 GPR65Q8IYL9 337 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 LRRC71Q8N4P6 559 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 PGBD4Q96DM1 585 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 SCLT1Q96NL6 688 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 SMOC1Q9H4F8 434 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 PSTPIP2Q9H939 334 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 AGO4Q9HCK5 861 aaKnown RBP12.12□□□□□ -0.47
VAMP1-204ENST00000535180 VPS45Q9NRW7 570 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 IGSF5Q9NSI5 407 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 CACNA2D2Q9NY47 1150 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
VAMP1-204ENST00000535180 MAFBQ9Y5Q3 323 aaPredicted RBP12.12□□□□□ -0.47
VAMP1-204ENST00000535180 ATG2BQ96BY7 2078 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 HOXA9P31269 272 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 MPLP40238 635 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 NMIQ13287 307 aaPredicted RBP12.11□□□□□ -0.47
VAMP1-204ENST00000535180 COL28A1Q2UY09 1125 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 PPM1LQ5SGD2 360 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 MIS18BP1Q6P0N0 1132 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 AGMOQ6ZNB7 445 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 TRMT1LQ7Z2T5 733 aaKnown RBP12.11□□□□□ -0.47
VAMP1-204ENST00000535180 GAB3Q8WWW8 586 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 NLRP7Q8WX94 980 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 ELSPBP1Q96BH3 223 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 EDEM2Q9BV94 578 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 CNNM2Q9H8M5 875 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 FBXW11Q9UKB1 542 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 PCDHA6Q9UN73 950 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 PRG3Q9Y2Y8 225 aaPredicted RBP12.11□□□□□ -0.47
VAMP1-204ENST00000535180 PCDHA8Q9Y5H6 950 aa12.11□□□□□ -0.47
VAMP1-204ENST00000535180 DDX39AO00148 427 aaKnown RBP12.1□□□□□ -0.47
VAMP1-204ENST00000535180 HYAL3O43820 417 aaPredicted RBP12.1□□□□□ -0.47
VAMP1-204ENST00000535180 XYLBO75191 536 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 POMCP01189 267 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 RPL17P18621 184 aaKnown RBP12.1□□□□□ -0.47
VAMP1-204ENST00000535180 SFPQP23246 707 aaKnown RBP eCLIP12.1□□□□□ -0.47
VAMP1-204ENST00000535180 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
VAMP1-204ENST00000535180 CREMQ03060 361 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 TROAPQ12815 778 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 PTGDRQ13258 359 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 TANGO2Q6ICL3 276 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 TCEAL6Q6IPX3 200 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 KBTBD6Q86V97 674 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 COLGALT2Q8IYK4 626 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 IRF7Q92985 503 aa12.1□□□□□ -0.47
VAMP1-204ENST00000535180 TCEAL3Q969E4 200 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms