RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 FAM187BQ17R55 369 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 LRRC26Q2I0M4 334 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 TEX35Q5T0J7 233 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 FOXR2Q6PJQ5 311 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 TAS1R3Q7RTX0 852 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 MAP4K3Q8IVH8 894 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 ACCSQ96QU6 501 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 TMEM206Q9H813 350 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 TMEM51Q9NW97 253 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 CDY2AQ9Y6F7 541 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 SQORQ9Y6N5 450 aa13.46□□□□□ -0.25
SCARB1-204ENST00000535005 M0QZ92 97 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 TULP2O00295 520 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 PITPNM1O00562 1244 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 PIGRP01833 764 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 CHRNA1P02708 482 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 CKBP12277 381 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 CDK11BP21127 795 aaKnown RBP13.46□□□□□ -0.26
SCARB1-204ENST00000535005 EIF4BP23588 611 aaKnown RBP13.46□□□□□ -0.26
SCARB1-204ENST00000535005 MBTD1Q05BQ5 628 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 TMEM62Q0P6H9 643 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 ELF2Q15723 593 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 KNOP1Q1ED39 458 aaKnown RBP13.46□□□□□ -0.26
SCARB1-204ENST00000535005 CENPPQ6IPU0 288 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 TRAF7Q6Q0C0 670 aa13.46□□□□□ -0.26
SCARB1-204ENST00000535005 DHX40Q8IX18 779 aaKnown RBP13.46□□□□□ -0.26
SCARB1-204ENST00000535005 ACKR2O00590 384 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 PSMA7O14818 248 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 SNRPFP62306 86 aaKnown RBP13.45□□□□□ -0.26
SCARB1-204ENST00000535005 KCNA1Q09470 495 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 STRN3Q13033 797 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 MAPK6Q16659 721 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 C11orf57Q6ZUT1 292 aaPredicted RBP13.45□□□□□ -0.26
SCARB1-204ENST00000535005 ZNF668Q96K58 619 aaPredicted RBP13.45□□□□□ -0.26
SCARB1-204ENST00000535005 SCLT1Q96NL6 688 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 OSMRQ99650 979 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 KCTD10Q9H3F6 313 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 MINDY3Q9H8M7 445 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 PRMT7Q9NVM4 692 aaPredicted RBP13.45□□□□□ -0.26
SCARB1-204ENST00000535005 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 MAPK8IP1Q9UQF2 711 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 ATP11BQ9Y2G3 1177 aa13.45□□□□□ -0.26
SCARB1-204ENST00000535005 INO80B-WBP1J3KQ70 363 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 PDXKO00764 312 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 PRKCBP05771 671 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 IQCF3P0C7M6 154 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 CCNE1P24864 410 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 AMHR2Q16671 573 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 ZNF618Q5T7W0 954 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 ZPBP2Q6X784 338 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 USP38Q8NB14 1042 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 TMEM174Q8WUU8 243 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 P2RX5Q93086 422 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 PPP1R16BQ96T49 567 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 NOC4LQ9BVI4 516 aaKnown RBP13.44□□□□□ -0.26
SCARB1-204ENST00000535005 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 RWDD2AQ9UIY3 292 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 TRAF3IP3Q9Y228 551 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 V9GYY5 206 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-204ENST00000535005 ZMYM2Q9UBW7 1377 aa13.44□□□□□ -0.26
SCARB1-204ENST00000535005 USP27XA6NNY8 438 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 TGFB1I1O43294 461 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 SELPP16109 830 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 PAK1Q13153 545 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 ZCWPW2Q504Y3 356 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 FAM43BQ6ZT52 329 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-204ENST00000535005 NELFCDQ8IXH7 590 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 GOLGA5Q8TBA6 731 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 TMEM40Q8WWA1 233 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 GBP3Q9H0R5 595 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 TYW1Q9NV66 732 aaKnown RBP13.43□□□□□ -0.26
SCARB1-204ENST00000535005 GINS2Q9Y248 185 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.43□□□□□ -0.261e-6■■■□□ 17.3
SCARB1-204ENST00000535005 BICDL2A1A5D9 508 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 CLTBP09497 229 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 CTSHP09668 335 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 LRRC63Q05C16 580 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 NAA30Q147X3 362 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-204ENST00000535005 NFIL3Q16649 462 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 FBXO47Q5MNV8 452 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 LRRC8DQ7L1W4 858 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 C12orf56Q8IXR9 622 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 SYCP3Q8IZU3 236 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 TXLNBQ8N3L3 684 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 NELFBQ8WX92 580 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 MED15Q96RN5 788 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 MRPL4Q9BYD3 311 aaKnown RBP13.43□□□□□ -0.26
SCARB1-204ENST00000535005 STYXL1Q9Y6J8 313 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 SIP14410 1827 aa13.43□□□□□ -0.26
SCARB1-204ENST00000535005 KIAA0355O15063 1070 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 PARNO95453 639 aaKnown RBP13.42□□□□□ -0.26
SCARB1-204ENST00000535005 EDN1P05305 212 aa13.42□□□□□ -0.26
SCARB1-204ENST00000535005 SFPQP23246 707 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■□□□ 12.9
SCARB1-204ENST00000535005 PRPF4BQ13523 1007 aaKnown RBP13.42□□□□□ -0.26
SCARB1-204ENST00000535005 MYBPC2Q14324 1141 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms