RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 FIGNQ5HY92 759 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CXCL17Q6UXB2 119 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MAP7D2Q96T17 732 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 BAG1Q99933 345 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 KATNAL1Q9BW62 490 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 LUC7L2Q9Y383 392 aaKnown RBP22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 SCN10AQ9Y5Y9 1956 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 VAMP7P51809 220 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ADAM17P78536 824 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MBTD1Q05BQ5 628 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CBWD6Q4V339 395 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CBWD3Q5JTY5 395 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CBWD5Q5RIA9 395 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 GPD1LQ8N335 351 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CCDC112Q8NEF3 446 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 FAM213AQ9BRX8 229 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MRPL4Q9BYD3 311 aaKnown RBP22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 NFKBIZQ9BYH8 718 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 SPC25Q9HBM1 224 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MBLAC1A4D2B0 266 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 FMO5P49326 533 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ZNF200P98182 395 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 C1orf220Q5T0J3 134 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ZPBP2Q6X784 338 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PXYLP1Q8TE99 480 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 LSM14BQ9BX40 385 aaKnown RBP22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 FAM49AQ9H0Q0 323 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 FZD8Q9H461 694 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 HDAC6Q9UBN7 1215 aa22.15■■□□□ 1.14
TNFRSF1A-205ENST00000534885 B4GALT5O43286 388 aa22.14■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PHKA2P46019 1235 aa22.14■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NKX3-2P78367 333 aa22.14■■□□□ 1.13
TNFRSF1A-205ENST00000534885 POU5F1BQ06416 359 aa22.14■■□□□ 1.13
TNFRSF1A-205ENST00000534885 RUFY4Q6ZNE9 571 aa22.14■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NEK11Q8NG66 645 aa22.14■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ACO2Q99798 780 aaKnown RBP22.14■■□□□ 1.13
TNFRSF1A-205ENST00000534885 AGO2Q9UKV8 859 aaKnown RBP22.14■■□□□ 1.13
TNFRSF1A-205ENST00000534885 A0A0B4J269 797 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TREHO43280 583 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NOL4O94818 638 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MYCNP04198 464 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 SLC9A1P19634 815 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MATR3P43243 847 aaKnown RBP eCLIP22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GPC3P51654 580 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NLRP11P59045 1033 aaKnown RBP22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 EXOC3L4Q17RC7 722 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 SLFN12LQ6IEE8 588 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NLRP7Q8WX94 980 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CCDC51Q96ER9 411 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MTG1Q9BT17 334 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 A0A1W2PQJ5 194 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ACKR2O00590 384 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 NRDCO43847 1150 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 EXTL3O43909 919 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 KPNA6O60684 536 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CYP2C9P11712 490 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ACOT2P49753 483 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PPP3CAQ08209 521 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TMEM62Q0P6H9 643 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 C7orf31Q8N865 590 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 DNAJC7Q99615 494 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MSTO1Q9BUK6 570 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GCNT4Q9P109 453 aa22.13■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TULP1O00294 542 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CLDN3O15551 220 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 STX10O60499 249 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 TOM1L1O75674 476 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 HARSP12081 509 aaKnown RBP22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ACTN1P12814 892 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PON1P27169 355 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CYP24A1Q07973 514 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ZBTB41Q5SVQ8 909 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 DPY19L2P1Q6NXN4 242 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 IFNLR1Q8IU57 520 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PARD3BQ8TEW8 1205 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CCDC127Q96BQ5 260 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MFSD14AQ96MC6 490 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 SCLT1Q96NL6 688 aa22.12■■□□□ 1.13
TNFRSF1A-205ENST00000534885 SMIM35A0A1B0GVV1 85 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 HOXC8P31273 242 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ZBED6P86452 979 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 PRPF4BQ13523 1007 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 KIZQ2M2Z5 673 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CRELD2Q6UXH1 353 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GBP6Q6ZN66 633 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 OR8K1Q8NGG5 319 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 IQCDQ96DY2 449 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 DDX20Q9UHI6 824 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 C17orf102A2RUQ5 167 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GTPBP10A4D1E9 387 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ZNF233A6NK53 670 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ABLIM1O14639 778 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ZNF500O60304 480 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 INHAP05111 366 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 GCLMP48507 274 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 MCCD1P59942 119 aaPredicted RBP22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 AMHR2Q16671 573 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 SEZ6Q53EL9 994 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 ZBTB33Q86T24 672 aa22.11■■□□□ 1.13
TNFRSF1A-205ENST00000534885 CDR2LQ86X02 465 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms