RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 S1PR5Q9H228 398 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 DNM3Q9UQ16 869 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 USTQ9Y2C2 406 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 IPPQ9Y573 584 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 MTCL1Q9Y4B5 1905 aaKnown RBP11.5□□□□□ -0.57
CSDE1-217ENST00000534699 CLASP2O75122 1294 aaKnown RBP11.5□□□□□ -0.57
CSDE1-217ENST00000534699 ATP2C1P98194 919 aaPredicted RBP11.5□□□□□ -0.57
CSDE1-217ENST00000534699 CES5AQ6NT32 575 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 ASAP3Q8TDY4 903 aa11.5□□□□□ -0.57
CSDE1-217ENST00000534699 TMEM150BA6NC51 233 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 MED24O75448 989 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 CXCL14O95715 111 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 GLP2RO95838 553 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 SOD2P04179 222 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 ATP2B1P20020 1258 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 IRS1P35568 1242 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 CCT6AP40227 531 aaKnown RBP11.49□□□□□ -0.57
CSDE1-217ENST00000534699 TECP42680 631 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 ZNF174Q15697 407 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 ADGRD2Q7Z7M1 963 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 COLGALT2Q8IYK4 626 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 ZDHHC14Q8IZN3 488 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 SMG8Q8ND04 991 aaKnown RBP11.49□□□□□ -0.57
CSDE1-217ENST00000534699 TRIM6Q9C030 488 aaPredicted RBP11.49□□□□□ -0.57
CSDE1-217ENST00000534699 CCDC113Q9H0I3 377 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 ADAM7Q9H2U9 754 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 TMEM189-UBE2V1I3L0A0 370 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 INO80B-WBP1J3KQ70 363 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 LILRB3O75022 631 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 POU5F1Q01860 360 aaKnown RBP11.49□□□□□ -0.57
CSDE1-217ENST00000534699 KIAA1841Q6NSI8 718 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 TRMT1LQ7Z2T5 733 aaKnown RBP11.49□□□□□ -0.57
CSDE1-217ENST00000534699 KSR1Q8IVT5 923 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 TMX3Q96JJ7 454 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 NTPCRQ9BSD7 190 aaKnown RBP11.49□□□□□ -0.57
CSDE1-217ENST00000534699 IRF2BPLQ9H1B7 796 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 SFXN1Q9H9B4 322 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 HCN4Q9Y3Q4 1203 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
CSDE1-217ENST00000534699 POTEMA6NI47 508 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 BRD1O95696 1058 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 ARF4P18085 180 aaPredicted RBP11.48□□□□□ -0.57
CSDE1-217ENST00000534699 FGFR4P22455 802 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
CSDE1-217ENST00000534699 CUL4AQ13619 759 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 C15orf39Q6ZRI6 1047 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 VN1R2Q8NFZ6 395 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 INTS4Q96HW7 963 aaKnown RBP11.48□□□□□ -0.57
CSDE1-217ENST00000534699 IGFLR1Q9H665 355 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 MAFFQ9ULX9 164 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 USP15Q9Y4E8 981 aaPredicted RBP11.48□□□□□ -0.57
CSDE1-217ENST00000534699 SLC11A1P49279 550 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 PTGDRQ13258 359 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 PLPP4Q5VZY2 271 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 VPS52Q8N1B4 723 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 TMEM87AQ8NBN3 555 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 RNF169Q8NCN4 708 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 MRPL17Q9NRX2 175 aaKnown RBP11.48□□□□□ -0.57
CSDE1-217ENST00000534699 SMC3Q9UQE7 1217 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 TNFSF13BQ9Y275 285 aa11.48□□□□□ -0.57
CSDE1-217ENST00000534699 H3BQ06 376 aaPredicted RBP11.47□□□□□ -0.57
CSDE1-217ENST00000534699 USO1O60763 962 aaKnown RBP11.47□□□□□ -0.57
CSDE1-217ENST00000534699 PRPF4BQ13523 1007 aaKnown RBP11.47□□□□□ -0.57
CSDE1-217ENST00000534699 UBALD2Q8IYN6 164 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 NXPE3Q969Y0 559 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 MFSD14AQ96MC6 490 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 PLEKHA4Q9H4M7 779 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 H3BQV1 296 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 ZC3H11AO75152 810 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSDE1-217ENST00000534699 PRKCBP05771 671 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 URODP06132 367 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 ADH1AP07327 375 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 TOB1P50616 345 aaPredicted RBP11.47□□□□□ -0.57
CSDE1-217ENST00000534699 DSG1Q02413 1049 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 TUSC3Q13454 348 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 SNX29Q8TEQ0 813 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 EDAQ92838 391 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 DDX27Q96GQ7 796 aaKnown RBP11.47□□□□□ -0.57
CSDE1-217ENST00000534699 RPS6KC1Q96S38 1066 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 OXCT2Q9BYC2 517 aaPredicted RBP11.47□□□□□ -0.57
CSDE1-217ENST00000534699 ODF2LQ9ULJ1 636 aa11.47□□□□□ -0.57
CSDE1-217ENST00000534699 ZFP37Q9Y6Q3 630 aaPredicted RBP11.47□□□□□ -0.57
CSDE1-217ENST00000534699 ARL5CA6NH57 179 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 LRRIQ4A6NIV6 560 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 NRP1O14786 923 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 LINC01565O15544 149 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 LONP1P36776 959 aaKnown RBP11.46□□□□□ -0.57
CSDE1-217ENST00000534699 PTPN14Q15678 1187 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 SYT2Q8N9I0 419 aaPredicted RBP11.46□□□□□ -0.57
CSDE1-217ENST00000534699 PIGOQ8TEQ8 1089 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 KLHL5Q96PQ7 755 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 CHST7Q9NS84 486 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 SLC38A7Q9NVC3 462 aa11.46□□□□□ -0.57
CSDE1-217ENST00000534699 MYH11P35749 1972 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms