RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 CPXCR1Q8N123 301 aa7.34□□□□□ -1.23
RAG1-203ENST00000534663 P2RX7Q99572 595 aaKnown RBP7.34□□□□□ -1.23
RAG1-203ENST00000534663 CBWD1Q9BRT8 395 aa7.34□□□□□ -1.23
RAG1-203ENST00000534663 ZNF577Q9BSK1 485 aa7.34□□□□□ -1.23
RAG1-203ENST00000534663 KCNMB3Q9NPA1 279 aa7.34□□□□□ -1.23
RAG1-203ENST00000534663 PARP2Q9UGN5 583 aa7.34□□□□□ -1.23
RAG1-203ENST00000534663 MCM8Q9UJA3 840 aa7.34□□□□□ -1.23
RAG1-203ENST00000534663 ANAPC7Q9UJX3 599 aa7.34□□□□□ -1.23
RAG1-203ENST00000534663 USP15Q9Y4E8 981 aaPredicted RBP7.34□□□□□ -1.23
RAG1-203ENST00000534663 TMEM150BA6NC51 233 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 PODXLO00592 558 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 RIPK2O43353 540 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 PIAS1O75925 651 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 AGTP01019 485 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 RARAP10276 462 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 PCK1P35558 622 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 MXI1P50539 228 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 ALDH5A1P51649 535 aaPredicted RBP7.34□□□□□ -1.24
RAG1-203ENST00000534663 BFSP1Q12934 665 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 SLMAPQ14BN4 828 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 PPP1R18Q6NYC8 613 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 HAUS1Q96CS2 278 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 IFT74Q96LB3 600 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 ZSWIM1Q9BR11 485 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 TRIM6Q9C030 488 aaPredicted RBP7.34□□□□□ -1.24
RAG1-203ENST00000534663 GLT8D2Q9H1C3 349 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 KDM4CQ9H3R0 1056 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 KCNQ5Q9NR82 932 aa7.34□□□□□ -1.24
RAG1-203ENST00000534663 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.34□□□□□ -1.24
RAG1-203ENST00000534663 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.34□□□□□ -1.24
RAG1-203ENST00000534663 MYO3BQ8WXR4 1341 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 CES2O00748 559 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 HIP1RO75146 1068 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 MYCNP04198 464 aaPredicted RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 MAPK4P31152 587 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 COILP38432 576 aaPredicted RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 AUHQ13825 339 aaKnown RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 ABCB5Q2M3G0 1257 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 SYDE2Q5VT97 1194 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 LMBRD2Q68DH5 695 aaPredicted RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 LLGL2Q6P1M3 1020 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 EXOC3L1Q86VI1 746 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 SLC47A2Q86VL8 602 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 PASD1Q8IV76 773 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 RASGEF1CQ8N431 466 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 ZSWIM2Q8NEG5 633 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 DHX38Q92620 1227 aaKnown RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 MIEF2Q96C03 454 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 BICD1Q96G01 975 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 ROBO3Q96MS0 1386 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 PLVAPQ9BX97 442 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 PITPNM3Q9BZ71 974 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 ANAPC5Q9UJX4 755 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 STXBP5LQ9Y2K9 1186 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 RPTORQ8N122 1335 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 DDTLA6NHG4 134 aaPredicted RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 ENO4A6NNW6 628 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 NDUFB10O96000 172 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 PDHA1P08559 390 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 BMP3P12645 472 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 ATF2P15336 505 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 ATF7P17544 494 aaPredicted RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 GAP43P17677 238 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 HSPA1LP34931 641 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 ZNF131P52739 623 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 RWDD2BP57060 319 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 RNASELQ05823 741 aaKnown RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 SPATA21Q7Z572 469 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 LXNQ9BS40 222 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 PI4K2AQ9BTU6 479 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 VPS37BQ9H9H4 285 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 DONSONQ9NYP3 566 aa7.33□□□□□ -1.24
RAG1-203ENST00000534663 NOP53Q9NZM5 478 aaKnown RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 ATXN2Q99700 1313 aaKnown RBP7.33□□□□□ -1.24
RAG1-203ENST00000534663 A0A0A6YYK5 440 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 RASA4BC9J798 803 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 GOLGA8SH3BPF8 625 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 GOLGA8MH3BSY2 632 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 SLC16A4O15374 487 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 SLC16A3O15427 465 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 RASA4O43374 803 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 GAS8O95995 478 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 NQO1P15559 274 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 CHKAP35790 457 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 MMP13P45452 471 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 CLK2P49760 499 aaKnown RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 VAMP7P51809 220 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 PEX3P56589 373 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 JAM2P57087 298 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 DNAJC3Q13217 504 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 XRCC4Q13426 336 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 FAM102BQ5T8I3 360 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ZDHHC24Q6UX98 284 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 SLFN11Q7Z7L1 901 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 SLC13A5Q86YT5 568 aaPredicted RBP7.32□□□□□ -1.24
RAG1-203ENST00000534663 C4orf33Q8N1A6 199 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 CERS5Q8N5B7 392 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 ETNPPLQ8TBG4 499 aa7.32□□□□□ -1.24
RAG1-203ENST00000534663 FBF1Q8TES7 1133 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms