RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SYNRGQ9UMZ2 1314 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 FRYLO94915 3013 aa3.65□□□□□ -1.83
CHMP4A-208ENST00000534106 DNAH14Q0VDD8 3507 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 CHD6Q8TD26 2715 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 A0A1W2PQ27 194 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 A0A1W2PQ64 194 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 A0A1W2PQC6 194 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 A0A1W2PQD8 194 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 SLC22A31A6NKX4 558 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 MINDY4BA8MYZ0 360 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 HRKO00198 91 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 CTAGE5O15320 804 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 DCXO43602 365 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 STRNO43815 780 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 ALDH1L1O75891 902 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 HTR3BO95264 441 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 F13A1P00488 732 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 CD4P01730 458 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 ASNSP08243 561 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 C6orf222P0C671 652 aaPredicted RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 CYP2C9P11712 490 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 GBP2P32456 591 aaPredicted RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 LMNB2Q03252 620 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 CALD1Q05682 793 aaKnown RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 TMEM62Q0P6H9 643 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 TMEM132BQ14DG7 1078 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 SEPT2Q15019 361 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 RALBP1Q15311 655 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 SNAP47Q5SQN1 464 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 GALNT18Q6P9A2 607 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 PSRC1Q6PGN9 363 aaPredicted RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 CXCL17Q6UXB2 119 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 EP400NLQ6ZTU2 488 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 TMC6Q7Z403 805 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 FAM126BQ8IXS8 530 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 SPICE1Q8N0Z3 855 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 CRACR2BQ8N4Y2 399 aaPredicted RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 DAGLBQ8NCG7 672 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 PHC3Q8NDX5 983 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 GDPD5Q8WTR4 605 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 MZB1Q8WU39 189 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 ATG4CQ96DT6 458 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 G6PC3Q9BUM1 346 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 HDAC8Q9BY41 377 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 HIPK3Q9H422 1215 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 UBE2ZQ9H832 354 aaPredicted RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 ALG13Q9NP73 1137 aaKnown RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 RAI14Q9P0K7 980 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 HMG20BQ9P0W2 317 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 MUTYHQ9UIF7 546 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 HERC5Q9UII4 1024 aaKnown RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 ZHX1Q9UKY1 873 aaPredicted RBP3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 TAF6LQ9Y6J9 622 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 ZNF521Q96K83 1311 aa3.64□□□□□ -1.83
CHMP4A-208ENST00000534106 LTBP2Q14767 1821 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 ECM29Q5VYK3 1845 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 CACNA1BQ00975 2339 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 BRWD1Q9NSI6 2320 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 A0A0U1RQG5 324 aaPredicted RBP3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 MED19A0JLT2 244 aaPredicted RBP3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 NUDT19A8MXV4 375 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 H0Y858 1186 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 MEIS1O00470 390 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 B4GALT4O60513 344 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 BUB1BO60566 1050 aaPredicted RBP3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 ADRB1P08588 477 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 ARP10275 920 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 FCER1AP12319 257 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 AKR1A1P14550 325 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 CDR1P51861 262 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 FAM160A1Q05DH4 1040 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 TFCP2Q12800 502 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 COG2Q14746 738 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 CLUL1Q15846 466 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 TCTN1Q2MV58 587 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 LEXMQ3ZCV2 418 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 CCDC184Q52MB2 194 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 SPTY2D1Q68D10 685 aaPredicted RBP3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 CCDC174Q6PII3 467 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 ZPBP2Q6X784 338 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 ASCL5Q7RTU5 278 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 TMC3Q7Z5M5 1100 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 GGNQ86UU5 652 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 METTL16Q86W50 562 aaKnown RBP3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 FAM129CQ86XR2 697 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 HERC6Q8IVU3 1022 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 ZNF655Q8N720 491 aaPredicted RBP3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 SPATA5Q8NB90 893 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 SYT8Q8NBV8 401 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 NUP133Q8WUM0 1156 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 C12orf42Q96LP6 360 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 GLT1D1Q96MS3 346 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 PWWP2AQ96N64 755 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 NEUROD6Q96NK8 337 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 MMP19Q99542 508 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 CHMP4AQ9BY43 222 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 TANGO6Q9C0B7 1094 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 KIAA1683Q9H0B3 1180 aa3.63□□□□□ -1.83
CHMP4A-208ENST00000534106 ADAM7Q9H2U9 754 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms