RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	MAP9	Q49MG5	647 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	ATP13A4	Q4VNC1	1196 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	ZBTB41	Q5SVQ8	909 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	WDR75	Q8IWA0	830 aa	Known RBP	6.03	□□□□□ -1.44
ATM-223	ENST00000533979	SLC5A5	Q92911	643 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	FERMT2	Q96AC1	680 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	ZNF512	Q96ME7	567 aa	Predicted RBP	6.03	□□□□□ -1.44
ATM-223	ENST00000533979	ANO3	Q9BYT9	981 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	CSRNP2	Q9H175	543 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	CAAP1	Q9H8G2	361 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	PARPBP	Q9NWS1	579 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	PRSS50	Q9UI38	385 aa		6.03	□□□□□ -1.44
ATM-223	ENST00000533979	NPIPB8	E9PQR5	432 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	HOXA3	O43365	443 aa	Predicted RBP	6.02	□□□□□ -1.45
ATM-223	ENST00000533979	SEC24D	O94855	1032 aa	Predicted RBP	6.02	□□□□□ -1.45
ATM-223	ENST00000533979	LY86	O95711	162 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	SPIDR	Q14159	915 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	TTF1	Q15361	905 aa	Predicted RBP	6.02	□□□□□ -1.45
ATM-223	ENST00000533979	ELAVL1	Q15717	326 aa	Known RBP	6.02	□□□□□ -1.45
ATM-223	ENST00000533979	TSHZ1	Q6ZSZ6	1077 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	RNF180	Q86T96	592 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	CXorf67	Q86X51	503 aa	Predicted RBP	6.02	□□□□□ -1.45
ATM-223	ENST00000533979	LYSMD2	Q8IV50	215 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	CACTIN	Q8WUQ7	758 aa	Known RBP	6.02	□□□□□ -1.45
ATM-223	ENST00000533979	USP7	Q93009	1102 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.02	□□□□□ -1.45
ATM-223	ENST00000533979	ENKD1	Q9H0I2	346 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	IFT22	Q9H7X7	185 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	6.02	□□□□□ -1.45
ATM-223	ENST00000533979	ING3	Q9NXR8	418 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	CEP72	Q9P209	647 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	MCM8	Q9UJA3	840 aa		6.02	□□□□□ -1.45
ATM-223	ENST00000533979	NARS	O43776	548 aa	Known RBP	6.01	□□□□□ -1.45
ATM-223	ENST00000533979	ALDH1A2	O94788	518 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	C1S	P09871	688 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	SOX5	P35711	763 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	SCNN1G	P51170	649 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	MANF	P55145	182 aa	Known RBP	6.01	□□□□□ -1.45
ATM-223	ENST00000533979	NRG3	P56975	720 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	DGCR2	P98153	550 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	CNGB1	Q14028	1251 aa	Predicted RBP	6.01	□□□□□ -1.45
ATM-223	ENST00000533979	FAM50A	Q14320	339 aa	Known RBP	6.01	□□□□□ -1.45
ATM-223	ENST00000533979	C4orf46	Q504U0	113 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	C19orf54	Q5BKX5	351 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	METTL24	Q5JXM2	366 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	SLC41A1	Q8IVJ1	513 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	PIK3C3	Q8NEB9	887 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	MDGA1	Q8NFP4	955 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	ARL8A	Q96BM9	186 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	EVI5L	Q96CN4	794 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	TTC1	Q99614	292 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	UBA5	Q9GZZ9	404 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	NCDN	Q9UBB6	729 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979	EIF4G1	Q04637	1599 aa	Known RBP	6.01	□□□□□ -1.45
ATM-223	ENST00000533979	BICRA	Q9NZM4	1560 aa		6.01	□□□□□ -1.45
ATM-223	ENST00000533979		A0A1W2PR48	441 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	LCHN	A4D1U4	455 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	NRP1	O14786	923 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	PPFIA4	O75335	1185 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	ULK1	O75385	1050 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	MAN2A2	P49641	1150 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	SESN3	P58005	492 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	PPP2R5A	Q15172	486 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	RALBP1	Q15311	655 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	CT47A1	Q5JQC4	288 aa	Predicted RBP	6	□□□□□ -1.45
ATM-223	ENST00000533979	LMBR1L	Q6UX01	489 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	HTR3D	Q70Z44	454 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	ZFPM1	Q8IX07	1006 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	OR14C36	Q8NHC7	312 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	FBXO41	Q8TF61	875 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	MNT	Q99583	582 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6	□□□□□ -1.45
ATM-223	ENST00000533979	PCED1A	Q9H1Q7	454 aa		6	□□□□□ -1.45
ATM-223	ENST00000533979	WASHC2C	Q9Y4E1	1318 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	GOLGA6L6	A8MZA4	724 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	NEMP1	O14524	444 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	PLIN1	O60240	522 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	CAND2	O75155	1236 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	IPO13	O94829	963 aa	Known RBP	5.99	□□□□□ -1.45
ATM-223	ENST00000533979	MCM7	P33993	719 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	HMGA2	P52926	109 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	RABGGTB	P53611	331 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	MCL1	Q07820	350 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	FAP	Q12884	760 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	CRHR2	Q13324	411 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	TUBA3C	Q13748	450 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	UBE3C	Q15386	1083 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	NAIF1	Q69YI7	327 aa	Predicted RBP	5.99	□□□□□ -1.45
ATM-223	ENST00000533979	TUBA3E	Q6PEY2	450 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979		Q6ZRM9	215 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.99	□□□□□ -1.45
ATM-223	ENST00000533979	OR5M3	Q8NGP4	307 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	ST8SIA2	Q92186	375 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	SLC39A13	Q96H72	371 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	PDCD2L	Q9BRP1	358 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	MRI	Q9BWK5	157 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	GPR87	Q9BY21	358 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	MS4A5	Q9H3V2	200 aa		5.99	□□□□□ -1.45
ATM-223	ENST00000533979	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
ATM-223	ENST00000533979	COMMD10	Q9Y6G5	202 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms