RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 DARSP14868 501 aaKnown RBP12.01□□□□□ -0.49
CSDE1-215ENST00000533818 RDXP35241 583 aaKnown RBP12.01□□□□□ -0.49
CSDE1-215ENST00000533818 DSG1Q02413 1049 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 LRRC32Q14392 662 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 TANGO2Q6ICL3 276 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 TBC1D10CQ8IV04 446 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 ENAHQ8N8S7 591 aaPredicted RBP12.01□□□□□ -0.49
CSDE1-215ENST00000533818 ING5Q8WYH8 240 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 PIK3R5Q8WYR1 880 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 ZSCAN10Q96SZ4 725 aaPredicted RBP12.01□□□□□ -0.49
CSDE1-215ENST00000533818 SDF4Q9BRK5 362 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 RBM12Q9NTZ6 932 aaKnown RBP12.01□□□□□ -0.49
CSDE1-215ENST00000533818 C2orf42Q9NWW7 574 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 PRG3Q9Y2Y8 225 aaPredicted RBP12.01□□□□□ -0.49
CSDE1-215ENST00000533818 ZNF462Q96JM2 2506 aa12.01□□□□□ -0.49
CSDE1-215ENST00000533818 J3QKU1 62 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 TK2O00142 265 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 CCL16O15467 120 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 XYLBO75191 536 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 CAVIN2O95810 425 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 CCNE1P24864 410 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 PXNP49023 591 aaPredicted RBP12□□□□□ -0.49
CSDE1-215ENST00000533818 CLCN3P51790 818 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 SIM1P81133 766 aaPredicted RBP12□□□□□ -0.49
CSDE1-215ENST00000533818 GRM2Q14416 872 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 SLC35G1Q2M3R5 365 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 UAP1L1Q3KQV9 507 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 PPM1LQ5SGD2 360 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 FAM160B1Q5W0V3 765 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
CSDE1-215ENST00000533818 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 CHCHD4Q8N4Q1 142 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 IRF7Q92985 503 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 ELSPBP1Q96BH3 223 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 MCRS1Q96EZ8 462 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 ZC3H10Q96K80 434 aaKnown RBP12□□□□□ -0.49
CSDE1-215ENST00000533818 SCLT1Q96NL6 688 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 UBL7Q96S82 380 aaPredicted RBP12□□□□□ -0.49
CSDE1-215ENST00000533818 MAP7D2Q96T17 732 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 TRMT61BQ9BVS5 477 aaKnown RBP12□□□□□ -0.49
CSDE1-215ENST00000533818 TRAIPQ9BWF2 469 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 SLC32A1Q9H598 525 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 CCDC86Q9H6F5 360 aaKnown RBP12□□□□□ -0.49
CSDE1-215ENST00000533818 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 JADE2Q9NQC1 790 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12□□□□□ -0.49
CSDE1-215ENST00000533818 MAD2L2Q9UI95 211 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 KCNH3Q9ULD8 1083 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 RAXQ9Y2V3 346 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 NEDD4P46934 1319 aa12□□□□□ -0.49
CSDE1-215ENST00000533818 CFAP46Q8IYW2 2715 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 SPAARA0A1B0GVQ0 90 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 H0Y626 953 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 CSDE1O75534 798 aaKnown RBP11.99□□□□□ -0.49
CSDE1-215ENST00000533818 ATG7O95352 703 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 TRIM16O95361 564 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 RPL17P18621 184 aaKnown RBP11.99□□□□□ -0.49
CSDE1-215ENST00000533818 CREB5Q02930 508 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 LIN9Q5TKA1 542 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 PDXDC2PQ6P474 469 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 Q6ZS52 159 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 CKAP2LQ8IYA6 745 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 RNF168Q8IYW5 571 aaPredicted RBP11.99□□□□□ -0.49
CSDE1-215ENST00000533818 B3GALT6Q96L58 329 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 CHST7Q9NS84 486 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 MARCH5Q9NX47 278 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 GDE1Q9NZC3 331 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 FNIP2Q9P278 1114 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 KANSL3Q9P2N6 904 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 SPTA1P02549 2419 aa11.99□□□□□ -0.49
CSDE1-215ENST00000533818 TICRRQ7Z2Z1 1910 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 IGKV6D-21A0A0A0MT36 114 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 PALM3A6NDB9 673 aaPredicted RBP11.98□□□□□ -0.49
CSDE1-215ENST00000533818 CDX4O14627 284 aaPredicted RBP11.98□□□□□ -0.49
CSDE1-215ENST00000533818 MEIS2O14770 477 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 ZNF623O75123 536 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 TMOD1P28289 359 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 OR1G1P47890 313 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 AFF1P51825 1210 aaKnown RBP11.98□□□□□ -0.49
CSDE1-215ENST00000533818 PLK5Q496M5 336 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 PABPC1LQ4VXU2 614 aaKnown RBP11.98□□□□□ -0.49
CSDE1-215ENST00000533818 EFCAB12Q6NXP0 572 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 TRMT1LQ7Z2T5 733 aaKnown RBP11.98□□□□□ -0.49
CSDE1-215ENST00000533818 PANK1Q8TE04 598 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 PGBD4Q96DM1 585 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 MBOAT7Q96N66 472 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 ZNF334Q9HCZ1 680 aaPredicted RBP11.98□□□□□ -0.49
CSDE1-215ENST00000533818 TRPV5Q9NQA5 729 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 KCNH7Q9NS40 1196 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 HCFC1R1Q9NWW0 138 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 MRPS23Q9Y3D9 190 aaKnown RBP11.98□□□□□ -0.49
CSDE1-215ENST00000533818 PIEZO2Q9H5I5 2752 aa11.98□□□□□ -0.49
CSDE1-215ENST00000533818 NFASCO94856 1347 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 CCDC163A0A0D9SF12 145 aa11.97□□□□□ -0.49
CSDE1-215ENST00000533818 BCLAF3A2AJT9 711 aaKnown RBP11.97□□□□□ -0.49
CSDE1-215ENST00000533818 PIK3CDO00329 1044 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms