RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 BEND2Q8NDZ0 799 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 GAB3Q8WWW8 586 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 PDCD2LQ9BRP1 358 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 MTFR1LQ9H019 292 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 USP36Q9P275 1121 aaKnown RBP4.37□□□□□ -1.71
BRCA2-205ENST00000533776 ZNHIT2Q9UHR6 403 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 PACSIN3Q9UKS6 424 aa4.37□□□□□ -1.71
BRCA2-205ENST00000533776 COL4A3Q01955 1670 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 CENPVL1A0A0U1RR11 272 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 PRSS38A1L453 326 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 FAM83GA6ND36 823 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 B3GALT2O43825 422 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 NRP2O60462 931 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 NRG3P56975 720 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 PPARAQ07869 468 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 TCEA2Q15560 299 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 DOK3Q7L591 496 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 LRRTM3Q86VH5 581 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 SLC46A2Q9BY10 475 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 CYP4F11Q9HBI6 524 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 ANKFY1Q9P2R3 1169 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 PPP2R3BQ9Y5P8 575 aa4.36□□□□□ -1.71
BRCA2-205ENST00000533776 PRR5-ARHGAP8B1AHC4 643 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 LEFTY2O00292 366 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 NCR1O76036 304 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 HSP90B1P14625 803 aaKnown RBP4.35□□□□□ -1.71
BRCA2-205ENST00000533776 SART3Q15020 963 aaKnown RBP4.35□□□□□ -1.71
BRCA2-205ENST00000533776 PCBP1Q15365 356 aaKnown RBP eCLIP4.35□□□□□ -1.71
BRCA2-205ENST00000533776 TKFCQ3LXA3 575 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 CCDC144BQ3MJ40 725 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 METTL24Q5JXM2 366 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 IQSEC1Q6DN90 963 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 BHLHA9Q7RTU4 235 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 GDF7Q7Z4P5 450 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 SYNPOQ8N3V7 929 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 LILRA3Q8N6C8 439 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-205ENST00000533776 SMC1BQ8NDV3 1235 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 RIOX1Q9H6W3 641 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.35□□□□□ -1.71
BRCA2-205ENST00000533776 SPON1Q9HCB6 807 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 SPTLC3Q9NUV7 552 aa4.35□□□□□ -1.71
BRCA2-205ENST00000533776 A0A1W2PR48 441 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 RNASET2O00584 256 aaKnown RBP4.34□□□□□ -1.71
BRCA2-205ENST00000533776 PRAMEF4O60810 478 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 CLEC2LP0C7M8 214 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 POU3F2P20265 443 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-205ENST00000533776 LSP1P33241 339 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 ZEB1P37275 1124 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-205ENST00000533776 GPR15P49685 360 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 RNASE9P60153 205 aaKnown RBP4.34□□□□□ -1.71
BRCA2-205ENST00000533776 KRTAP10-11P60412 298 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 IL2P60568 153 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 UBE3CQ15386 1083 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 GPR158Q5T848 1215 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 Q6YL49 198 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 HOMER1Q86YM7 354 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 GLB1L2Q8IW92 636 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 DHX37Q8IY37 1157 aaKnown RBP4.34□□□□□ -1.71
BRCA2-205ENST00000533776 ZNF610Q8N9Z0 462 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 MYEOVQ96EZ4 313 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 RNPC3Q96LT9 517 aaKnown RBP4.34□□□□□ -1.71
BRCA2-205ENST00000533776 DCLRE1CQ96SD1 692 aaKnown RBP4.34□□□□□ -1.71
BRCA2-205ENST00000533776 ANO3Q9BYT9 981 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 WDR11Q9BZH6 1224 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 PIF1Q9H611 641 aa4.34□□□□□ -1.71
BRCA2-205ENST00000533776 EVLQ9UI08 416 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-205ENST00000533776 ZMYM3Q14202 1370 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 NDUFA10O95299 355 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 LTA4HP09960 611 aaKnown RBP4.33□□□□□ -1.72
BRCA2-205ENST00000533776 SCNN1BP51168 640 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 MANFP55145 182 aaKnown RBP4.33□□□□□ -1.72
BRCA2-205ENST00000533776 PHC1P78364 1004 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 OCRLQ01968 901 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 APBA1Q02410 837 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 NHLH2Q02577 135 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 SEPT7Q16181 437 aaKnown RBP4.33□□□□□ -1.72
BRCA2-205ENST00000533776 CCDC178Q5BJE1 867 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 CCDC62Q6P9F0 684 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 SUPT20HQ8NEM7 779 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 OR10H5Q8NGA6 315 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 NINJ1Q92982 152 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 CDC5LQ99459 802 aaKnown RBP4.33□□□□□ -1.72
BRCA2-205ENST00000533776 TARS2Q9BW92 718 aaKnown RBP4.33□□□□□ -1.72
BRCA2-205ENST00000533776 TEX101Q9BY14 249 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 TOR3AQ9H497 397 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 SERHL2Q9H4I8 314 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 AKIP1Q9NQ31 210 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 FANCLQ9NW38 375 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 PTGFRNQ9P2B2 879 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 PRSS50Q9UI38 385 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 CLCA2Q9UQC9 943 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 CHST2Q9Y4C5 530 aa4.33□□□□□ -1.72
BRCA2-205ENST00000533776 TMEM200CA6NKL6 621 aa4.32□□□□□ -1.72
BRCA2-205ENST00000533776 ZAR1LA6NP61 321 aa4.32□□□□□ -1.72
BRCA2-205ENST00000533776 KDM1AO60341 852 aa4.32□□□□□ -1.72
BRCA2-205ENST00000533776 RAB11FIP3O75154 756 aa4.32□□□□□ -1.72
BRCA2-205ENST00000533776 CANXP27824 592 aaKnown RBP4.32□□□□□ -1.72
BRCA2-205ENST00000533776 ADCYAP1R1P41586 468 aa4.32□□□□□ -1.72
BRCA2-205ENST00000533776 LSSP48449 732 aa4.32□□□□□ -1.72
BRCA2-205ENST00000533776 USP14P54578 494 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms