RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 MRPL10Q7Z7H8 261 aaKnown RBP19.25■□□□□ 0.67
NXF1-217ENST00000533671 THNSL1Q8IYQ7 743 aa19.25■□□□□ 0.67
NXF1-217ENST00000533671 LRRC15Q8TF66 581 aa19.25■□□□□ 0.67
NXF1-217ENST00000533671 SPATA32Q96LK8 384 aa19.25■□□□□ 0.67
NXF1-217ENST00000533671 CCDC113Q9H0I3 377 aa19.25■□□□□ 0.67
NXF1-217ENST00000533671 TMEM134Q9H6X4 195 aa19.25■□□□□ 0.67
NXF1-217ENST00000533671 LMCD1Q9NZU5 365 aa19.25■□□□□ 0.67
NXF1-217ENST00000533671 PRRC2BQ5JSZ5 2229 aaKnown RBP19.25■□□□□ 0.67
NXF1-217ENST00000533671 MEIS3P2A8K0S8 358 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 LPXNO60711 386 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 OFD1O75665 1012 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 LINC00271P0C7V0 271 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 GIT2Q14161 759 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 CSPP1Q1MSJ5 1256 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 ATF7IP2Q5U623 682 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 AGMOQ6ZNB7 445 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 DYMQ7RTS9 669 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 COLGALT1Q8NBJ5 622 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 SMG8Q8ND04 991 aaKnown RBP19.24■□□□□ 0.67
NXF1-217ENST00000533671 SPIRE2Q8WWL2 714 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 P2RX5Q93086 422 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 ZNF558Q96NG5 402 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 FAM193BQ96PV7 902 aaPredicted RBP19.24■□□□□ 0.67
NXF1-217ENST00000533671 MRPL4Q9BYD3 311 aaKnown RBP19.24■□□□□ 0.67
NXF1-217ENST00000533671 CWH43Q9H720 699 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 PARVGQ9HBI0 331 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 ARHGAP28Q9P2N2 729 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 HCSTQ9UBK5 93 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 PARP2Q9UGN5 583 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 RCOR1Q9UKL0 485 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 PCDHA7Q9UN72 937 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 USP20Q9Y2K6 914 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 HES2Q9Y543 173 aa19.24■□□□□ 0.67
NXF1-217ENST00000533671 CHD9Q3L8U1 2897 aa19.23■□□□□ 0.67
NXF1-217ENST00000533671 PLXNA4Q9HCM2 1894 aa19.23■□□□□ 0.67
NXF1-217ENST00000533671 CSPG5O95196 566 aa19.23■□□□□ 0.67
NXF1-217ENST00000533671 POU3F3P20264 500 aaPredicted RBP19.23■□□□□ 0.67
NXF1-217ENST00000533671 LRRC55Q6ZSA7 311 aa19.23■□□□□ 0.67
NXF1-217ENST00000533671 KLHL23Q8NBE8 558 aa19.23■□□□□ 0.67
NXF1-217ENST00000533671 MRPL38Q96DV4 380 aaKnown RBP19.23■□□□□ 0.67
NXF1-217ENST00000533671 GBP3Q9H0R5 595 aa19.23■□□□□ 0.67
NXF1-217ENST00000533671 NXF3Q9H4D5 531 aaKnown RBP19.23■□□□□ 0.67
NXF1-217ENST00000533671 PDZD7Q9H5P4 517 aa19.23■□□□□ 0.67
NXF1-217ENST00000533671 ALG13Q9NP73 1137 aaKnown RBP19.23■□□□□ 0.67
NXF1-217ENST00000533671 KANSL3Q9P2N6 904 aa19.23■□□□□ 0.67
NXF1-217ENST00000533671 TTLL13PA6NNM8 815 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 K7ENM7 598 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 ZC3H11AO75152 810 aaKnown RBP eCLIP19.22■□□□□ 0.67
NXF1-217ENST00000533671 ALDH7A1P49419 539 aaKnown RBP19.22■□□□□ 0.67
NXF1-217ENST00000533671 DCAF4L1Q3SXM0 396 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 SHC4Q6S5L8 630 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 KCNT2Q6UVM3 1135 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 IQUBQ8NA54 791 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 DDX12PQ92771 950 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 DHX58Q96C10 678 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 BICD1Q96G01 975 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 NTPCRQ9BSD7 190 aaKnown RBP19.22■□□□□ 0.67
NXF1-217ENST00000533671 TCHPQ9BT92 498 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 LRRC27Q9C0I9 530 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 LMAN2LQ9H0V9 348 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 PLAGL2Q9UPG8 496 aa19.22■□□□□ 0.67
NXF1-217ENST00000533671 A0A087X0B3 334 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 GRM6O15303 877 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 TRAK2O60296 914 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 POMCP01189 267 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 ITGB1P05556 798 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 IDEP14735 1019 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 AKAP5P24588 427 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 PPM1AP35813 382 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 ANP32AP39687 249 aaKnown RBP19.21■□□□□ 0.67
NXF1-217ENST00000533671 MATR3P43243 847 aaKnown RBP eCLIP19.21■□□□□ 0.67
NXF1-217ENST00000533671 KRT17Q04695 432 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 AXDND1Q5T1B0 1012 aaPredicted RBP19.21■□□□□ 0.67
NXF1-217ENST00000533671 NT5DC1Q5TFE4 455 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 HAUS6Q7Z4H7 955 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 FAM178BQ8IXR5 827 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 TMEM161BQ8NDZ6 487 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 LEO1Q8WVC0 666 aaPredicted RBP19.21■□□□□ 0.67
NXF1-217ENST00000533671 RPS6KC1Q96S38 1066 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 GAD1Q99259 594 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 TARS2Q9BW92 718 aaKnown RBP19.21■□□□□ 0.67
NXF1-217ENST00000533671 SCAND2PQ9GZW5 306 aaPredicted RBP19.21■□□□□ 0.67
NXF1-217ENST00000533671 RNF39Q9H2S5 420 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 CUEDC2Q9H467 287 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 TBC1D13Q9NVG8 400 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 PUF60Q9UHX1 559 aaKnown RBP19.21■□□□□ 0.67
NXF1-217ENST00000533671 GIT1Q9Y2X7 761 aa19.21■□□□□ 0.67
NXF1-217ENST00000533671 CARNS1A5YM72 827 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 MYMKA6NI61 221 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 FGF18O76093 207 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 EDN1P05305 212 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 MAPTP10636 758 aaKnown RBP19.2■□□□□ 0.66
NXF1-217ENST00000533671 MLH1P40692 756 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 ZNF131P52739 623 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 NCKAP1LP55160 1127 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 AMPD3Q01432 767 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 ZNF568Q3ZCX4 644 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 TPRNQ4KMQ1 711 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 TIGD5Q53EQ6 642 aa19.2■□□□□ 0.66
NXF1-217ENST00000533671 EEF1DP3Q658K8 133 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms