RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 SAMM50Q9Y512 469 aa8.78□□□□□ -1
NXF1-215ENST00000533440 PCDHB2Q9Y5E7 798 aa8.78□□□□□ -1
NXF1-215ENST00000533440 V9GY48 417 aaPredicted RBP8.78□□□□□ -1
NXF1-215ENST00000533440 COL4A3Q01955 1670 aa8.78□□□□□ -1
NXF1-215ENST00000533440 CNTNAP2Q9UHC6 1331 aa8.78□□□□□ -1
NXF1-215ENST00000533440 ASPMQ8IZT6 3477 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 BAHCC1Q9P281 2608 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 ESYT2A0FGR8 921 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 ADAMTS3O15072 1205 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 TGM5O43548 720 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 GAS2O43903 313 aaKnown RBP8.77□□□□□ -1.01
NXF1-215ENST00000533440 STBD1O95210 358 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 SPATA31D3P0C874 917 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 MYBP10242 640 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 SFNP31947 248 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 DNM2P50570 870 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 DSC1Q08554 894 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 SLC44A4Q53GD3 710 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 PRR16Q569H4 304 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 UBXN11Q5T124 520 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 APOA5Q6Q788 366 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 SPATA31D4Q6ZUB0 917 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 COLGALT2Q8IYK4 626 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 GPR65Q8IYL9 337 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 ST13P5Q8NFI4 369 aaPredicted RBP8.77□□□□□ -1.01
NXF1-215ENST00000533440 PHKBQ93100 1093 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 CLDN23Q96B33 292 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 MBOAT7Q96N66 472 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 LRRC2Q9BYS8 371 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 IFT122Q9HBG6 1241 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 LTB4R2Q9NPC1 389 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 AGPAT5Q9NUQ2 364 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 FNIP2Q9P278 1114 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 SUCLA2Q9P2R7 463 aaPredicted RBP8.77□□□□□ -1.01
NXF1-215ENST00000533440 USP18Q9UMW8 372 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 PRG3Q9Y2Y8 225 aaPredicted RBP8.77□□□□□ -1.01
NXF1-215ENST00000533440 MYH15Q9Y2K3 1946 aa8.77□□□□□ -1.01
NXF1-215ENST00000533440 FAM170BA6NMN3 283 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 SLC30A4O14863 429 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 MSH4O15457 936 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 EDIL3O43854 480 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 MAFO75444 373 aaPredicted RBP8.76□□□□□ -1.01
NXF1-215ENST00000533440 ZMYND10O75800 440 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 POMCP01189 267 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 NCLP19338 710 aaKnown RBP8.76□□□□□ -1.01
NXF1-215ENST00000533440 FSHRP23945 695 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 HOXA11P31270 313 aaPredicted RBP8.76□□□□□ -1.01
NXF1-215ENST00000533440 RPS9P46781 194 aaKnown RBP8.76□□□□□ -1.01
NXF1-215ENST00000533440 OR1G1P47890 313 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 JAK3P52333 1124 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 UBXN2BQ14CS0 331 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 MTERF2Q49AM1 385 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 XKR3Q5GH77 459 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 SYNE3Q6ZMZ3 975 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 MTSS1LQ765P7 747 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 PALB2Q86YC2 1186 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 RHPN2Q8IUC4 686 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 KSR1Q8IVT5 923 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 RDM1Q8NG50 284 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 EXOC6Q8TAG9 804 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 RIT2Q99578 217 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 FAM126AQ9BYI3 521 aaPredicted RBP8.76□□□□□ -1.01
NXF1-215ENST00000533440 ZMYND12Q9H0C1 365 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 UNC45AQ9H3U1 944 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 UBN1Q9NPG3 1134 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 PRMT8Q9NR22 394 aaPredicted RBP8.76□□□□□ -1.01
NXF1-215ENST00000533440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.76□□□□□ -1.01
NXF1-215ENST00000533440 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
NXF1-215ENST00000533440 CDH7Q9ULB5 785 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 DOCK6Q96HP0 2047 aa8.76□□□□□ -1.01
NXF1-215ENST00000533440 TMEM150BA6NC51 233 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 F8W810 466 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 SLC27A2O14975 620 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 TARSP26639 723 aaKnown RBP8.75□□□□□ -1.01
NXF1-215ENST00000533440 PFKPQ01813 784 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 FZD5Q13467 585 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 RTN1Q16799 776 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 PFKFB3Q16875 520 aaPredicted RBP8.75□□□□□ -1.01
NXF1-215ENST00000533440 PPM1JQ5JR12 505 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 ZBTB41Q5SVQ8 909 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 TSSK4Q6SA08 328 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 B3GNT9Q6UX72 402 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 GRASPQ7Z6J2 395 aaPredicted RBP8.75□□□□□ -1.01
NXF1-215ENST00000533440 REXO1Q8N1G1 1221 aaKnown RBP8.75□□□□□ -1.01
NXF1-215ENST00000533440 SMG8Q8ND04 991 aaKnown RBP8.75□□□□□ -1.01
NXF1-215ENST00000533440 CNNM3Q8NE01 707 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 NETO1Q8TDF5 533 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 SLC5A5Q92911 643 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 NLRP4Q96MN2 994 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 NELL2Q99435 816 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 SH2D3AQ9BRG2 576 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 LSG1Q9H089 658 aaKnown RBP8.75□□□□□ -1.01
NXF1-215ENST00000533440 MINDY3Q9H8M7 445 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 MIOSQ9NXC5 875 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 SEPT9Q9UHD8 586 aaPredicted RBP8.75□□□□□ -1.01
NXF1-215ENST00000533440 GMEB2Q9UKD1 530 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 BRPF3Q9ULD4 1205 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 ATRXP46100 2492 aa8.75□□□□□ -1.01
NXF1-215ENST00000533440 ARL5CA6NH57 179 aa8.74□□□□□ -1.01
NXF1-215ENST00000533440 SHISA7A6NL88 538 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms