RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 DHX8Q14562 1220 aaKnown RBP22.53■■□□□ 1.2
CCS-208ENST00000533244 NOMO2Q5JPE7 1267 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 NT5DC1Q5TFE4 455 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 SHC4Q6S5L8 630 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 CCDC73Q6ZRK6 1079 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 KLHL23Q8NBE8 558 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 RNF39Q9H2S5 420 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 UBN1Q9NPG3 1134 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 PLAGL2Q9UPG8 496 aa22.53■■□□□ 1.2
CCS-208ENST00000533244 NPTXRO95502 500 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 ITGB1P05556 798 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 ITGA4P13612 1032 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 PTPROQ16827 1216 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 CSPP1Q1MSJ5 1256 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 TMEM161BQ8NDZ6 487 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 NXF3Q9H4D5 531 aaKnown RBP22.52■■□□□ 1.2
CCS-208ENST00000533244 TBC1D13Q9NVG8 400 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 LARSQ9P2J5 1176 aaKnown RBP22.52■■□□□ 1.2
CCS-208ENST00000533244 USP20Q9Y2K6 914 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 HES2Q9Y543 173 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 PCDHB12Q9Y5F1 795 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 PLXNA4Q9HCM2 1894 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 ZMYM2Q9UBW7 1377 aa22.52■■□□□ 1.2
CCS-208ENST00000533244 SLC16A4O15374 487 aa22.51■■□□□ 1.19
CCS-208ENST00000533244 NCKAP1LP55160 1127 aa22.51■■□□□ 1.19
CCS-208ENST00000533244 SPOUT1Q5T280 376 aaKnown RBP22.51■■□□□ 1.19
CCS-208ENST00000533244 EEF1DP3Q658K8 133 aa22.51■■□□□ 1.19
CCS-208ENST00000533244 SPPL3Q8TCT6 385 aa22.51■■□□□ 1.19
CCS-208ENST00000533244 TRIM6Q9C030 488 aaPredicted RBP22.51■■□□□ 1.19
CCS-208ENST00000533244 PCDHA7Q9UN72 937 aa22.51■■□□□ 1.19
CCS-208ENST00000533244 LIG1P18858 919 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 AFF1P51825 1210 aaKnown RBP22.5■■□□□ 1.19
CCS-208ENST00000533244 SMTNP53814 917 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 CAMK1Q14012 370 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 CCDC85BQ15834 202 aaPredicted RBP22.5■■□□□ 1.19
CCS-208ENST00000533244 E2F4Q16254 413 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 KCNT2Q6UVM3 1135 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 MICALL1Q8N3F8 863 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 FIZ1Q96SL8 496 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 PARVGQ9HBI0 331 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 ALG13Q9NP73 1137 aaKnown RBP22.5■■□□□ 1.19
CCS-208ENST00000533244 TNFSF13BQ9Y275 285 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 INPP5FQ9Y2H2 1132 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 GIT1Q9Y2X7 761 aa22.5■■□□□ 1.19
CCS-208ENST00000533244 MAPTP10636 758 aaKnown RBP22.49■■□□□ 1.19
CCS-208ENST00000533244 DNAJB1P25685 340 aa22.49■■□□□ 1.19
CCS-208ENST00000533244 STAT6P42226 847 aa22.49■■□□□ 1.19
CCS-208ENST00000533244 UBE3AQ05086 875 aa22.49■■□□□ 1.19
CCS-208ENST00000533244 ATF7IP2Q5U623 682 aa22.49■■□□□ 1.19
CCS-208ENST00000533244 HACE1Q8IYU2 909 aa22.49■■□□□ 1.19
CCS-208ENST00000533244 PPM1EQ8WY54 764 aa22.49■■□□□ 1.19
CCS-208ENST00000533244 ZNF558Q96NG5 402 aa22.49■■□□□ 1.19
CCS-208ENST00000533244 ACO2Q99798 780 aaKnown RBP22.49■■□□□ 1.19
CCS-208ENST00000533244 PTPRHQ9HD43 1115 aa22.49■■□□□ 1.19
CCS-208ENST00000533244 MYMKA6NI61 221 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 B4GALT3O60512 393 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 FGF18O76093 207 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 FAM13AO94988 1023 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 SCP2P22307 547 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 ME1P48163 572 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 KRT85P78386 507 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 PLCB3Q01970 1234 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 DCAF4L1Q3SXM0 396 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 TIGD5Q53EQ6 642 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 SV2BQ7L1I2 683 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 SLC39A11Q8N1S5 342 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 URGCPQ8TCY9 931 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 DNAJC19Q96DA6 116 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 CHAMP1Q96JM3 812 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 ADPGKQ9BRR6 497 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 MRPL4Q9BYD3 311 aaKnown RBP22.48■■□□□ 1.19
CCS-208ENST00000533244 PANK2Q9BZ23 570 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 NRDE2Q9H7Z3 1164 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 KANSL3Q9P2N6 904 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 ATP6V1DQ9Y5K8 247 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 SPTBN5Q9NRC6 3674 aaKnown RBP22.48■■□□□ 1.19
CCS-208ENST00000533244 MYO7AQ13402 2215 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 ARL5CA6NH57 179 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 H0YCG3 227 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 ABLIM1O14639 778 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 KRT18P05783 430 aaKnown RBP22.48■■□□□ 1.19
CCS-208ENST00000533244 PROZP22891 400 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 PPM1AP35813 382 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 PBX3P40426 434 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 MLH1P40692 756 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 TMEM132AQ24JP5 1023 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 RESP18Q5W5W9 173 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 THNSL1Q8IYQ7 743 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 PDILTQ8N807 584 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 GSTCDQ8NEC7 633 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 LEO1Q8WVC0 666 aaPredicted RBP22.48■■□□□ 1.19
CCS-208ENST00000533244 POF1BQ8WVV4 589 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 DDX12PQ92771 950 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 GAD1Q99259 594 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 LZTS1Q9Y250 596 aa22.48■■□□□ 1.19
CCS-208ENST00000533244 UNC80Q8N2C7 3258 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 CARNS1A5YM72 827 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 TBCAO75347 108 aaKnown RBP22.47■■□□□ 1.19
CCS-208ENST00000533244 AKAP5P24588 427 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 BCAR1P56945 870 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms