RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 DHRS4Q9BTZ2 278 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 PHF20Q9BVI0 1012 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 PARVGQ9HBI0 331 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 AS3MTQ9HBK9 375 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 FANCLQ9NW38 375 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 TMEM260Q9NX78 707 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 BTG4Q9NY30 223 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 ATXN10Q9UBB4 475 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 EPS15L1Q9UBC2 864 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 PPARGC1AQ9UBK2 798 aaKnown RBP6.05□□□□□ -1.44
CD44-236ENST00000533222 GTF3C4Q9UKN8 822 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 RWDD3Q9Y3V2 267 aa6.05□□□□□ -1.44
CD44-236ENST00000533222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.05□□□□□ -1.44
CD44-236ENST00000533222 ABCA10Q8WWZ4 1543 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 GAKO14976 1311 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 ZNF644Q9H582 1327 aaPredicted RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 hCG_2014768A0A024R1R8 64 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 IQANK1A0A1B0GTG1 560 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 A0A1W2PQ45 241 aaPredicted RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 A0A1W2PQY0 241 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 EME2A4GXA9 379 aaPredicted RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 M0QX08 132 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 PRC1O43663 620 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 MGRN1O60291 552 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 ZNF189O75820 626 aaPredicted RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 DNAJC8O75937 253 aaPredicted RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 NPTXRO95502 500 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 RPN1P04843 607 aaKnown RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 CPA3P15088 417 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 RAC2P15153 192 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 ITGB5P18084 799 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 MATR3P43243 847 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD44-236ENST00000533222 RANBP1P43487 201 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 SUMO1P63165 101 aaKnown RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 SULT2A1Q06520 285 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 NONOQ15233 471 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD44-236ENST00000533222 RASA2Q15283 850 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 NR0B2Q15466 257 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 LONRF2Q1L5Z9 754 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 SPATA1Q5VX52 437 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 DBX2Q6ZNG2 339 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 ZNF662Q6ZS27 426 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 B4GALNT4Q76KP1 1039 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 NLRP9Q7RTR0 991 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 MAATS1Q7Z4T9 603 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 ATG4DQ86TL0 474 aaPredicted RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 LUZP1Q86V48 1076 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 NLRP10Q86W26 655 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 SCUBE1Q8IWY4 988 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 CLASRPQ8N2M8 674 aaKnown RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 ESX1Q8N693 406 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 CFAP61Q8NHU2 1237 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 ABHD4Q8TB40 342 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 LMBR1Q8WVP7 490 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 P3H4Q92791 437 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 DIO2Q92813 273 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 CCDC120Q96HB5 630 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 CCDC140Q96MF4 163 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 LRRC27Q9C0I9 530 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 CENPHQ9H3R5 247 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 SEMA4AQ9H3S1 761 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 CLK4Q9HAZ1 481 aaKnown RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 MKS1Q9NXB0 559 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 PGAP2Q9UHJ9 254 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 HERC5Q9UII4 1024 aaKnown RBP6.04□□□□□ -1.44
CD44-236ENST00000533222 ASAP1Q9ULH1 1129 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 GIT1Q9Y2X7 761 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 PCDHGB3Q9Y5G1 929 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 CARMIL2Q6F5E8 1435 aa6.04□□□□□ -1.44
CD44-236ENST00000533222 MYPNQ86TC9 1320 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 UACAQ9BZF9 1416 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 BOLA2-SMG1P6H3BVE0 249 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 MAP2K7O14733 419 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 SHOX2O60902 331 aaPredicted RBP6.03□□□□□ -1.44
CD44-236ENST00000533222 STAMBPO95630 424 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 LDHCP07864 332 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 VIMP08670 466 aaKnown RBP6.03□□□□□ -1.44
CD44-236ENST00000533222 FPR2P25090 351 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 LTBRP36941 435 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 LIFRP42702 1097 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 AFMP43652 599 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 IRAK1P51617 712 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 INHBCP55103 352 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 CDK17Q00537 523 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 TRAP1Q12931 704 aaKnown RBP6.03□□□□□ -1.44
CD44-236ENST00000533222 KCNAB2Q13303 367 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 TAF11Q15544 211 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 TESK1Q15569 626 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 ALDH1L2Q3SY69 923 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 NDUFAF5Q5TEU4 345 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 E4F1Q66K89 784 aaPredicted RBP6.03□□□□□ -1.44
CD44-236ENST00000533222 FCRLBQ6BAA4 426 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 NEPROQ6NW34 567 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 OLFML1Q6UWY5 402 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 NEK10Q6ZWH5 1172 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 RUFY3Q7L099 469 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 SAPCD2Q86UD0 394 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 SPPL2CQ8IUH8 684 aa6.03□□□□□ -1.44
CD44-236ENST00000533222 CCDC146Q8IYE0 955 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms