RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 PDE1BQ01064 536 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ST3GAL1Q11201 340 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 LRRC14Q15048 493 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ASIC2Q16515 512 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 PTPROQ16827 1216 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 RNF220Q5VTB9 566 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 HAUS3Q68CZ6 603 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 SH3BP5LQ7L8J4 393 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ANKRD13AQ8IZ07 590 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 STK32AQ8WU08 396 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 GJA10Q969M2 543 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 LY9Q9HBG7 655 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 FGFR1OP2Q9NVK5 253 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 NDE1Q9NXR1 346 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 IL1RAPL1Q9NZN1 696 aa7.26□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF233A6NK53 670 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 HNRNPRO43390 633 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 DNAJC6O75061 913 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 KRT2P35908 639 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 PDE4DQ08499 809 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 ITGB3BPQ13352 177 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 MED21Q13503 144 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 P3H1Q32P28 736 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 Q3C1V9 767 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 MAP3K21Q5TCX8 1036 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 TLDC1Q6P9B6 456 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 SLC17A8Q8NDX2 589 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 PPP1R13LQ8WUF5 828 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 SREK1Q8WXA9 508 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 CALML4Q96GE6 196 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 AGBL1Q96MI9 1066 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 AP1M1Q9BXS5 423 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 EIF2AQ9BY44 585 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 NDEL1Q9GZM8 345 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 WDR35Q9P2L0 1181 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 AMFRQ9UKV5 643 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 R3HDM2Q9Y2K5 976 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 COMMD3-BMI1R4GMX3 469 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 NRAPQ86VF7 1730 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 ESRRAP11474 423 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 CYP2B6P20813 491 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 MARK3P27448 753 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 TMEM259Q4ZIN3 620 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 PRR16Q569H4 304 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 SEL1L2Q5TEA6 688 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 OTUD6AQ7L8S5 288 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 CCDC105Q8IYK2 499 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 NEDD1Q8NHV4 660 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 NMD3Q96D46 503 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 SH2D3AQ9BRG2 576 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 CSRNP2Q9H175 543 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 PFDN4Q9NQP4 134 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 TMEM260Q9NX78 707 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 ASIC3Q9UHC3 531 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 HERC5Q9UII4 1024 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 IKBKGQ9Y6K9 419 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 MCF2LO15068 1137 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 SPAG7O75391 227 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 DEXIO95424 95 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 STAMBPO95630 424 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 AGTP01019 485 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 SYDE2Q5VT97 1194 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 CD302Q8IX05 232 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 PPP1R14CQ8TAE6 165 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 PIP4K2CQ8TBX8 421 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 CCT6BQ92526 530 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 EEF2KMTQ96G04 330 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 ABHD8Q96I13 439 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 TGS1Q96RS0 853 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 TTC1Q99614 292 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 TMEM60Q9H2L4 133 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 MLXIPLQ9NP71 852 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 SLC5A4Q9NY91 659 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 MYO9BQ13459 2157 aa7.25□□□□□ -1.25
TGFBR3-209ENST00000532540 A0A0U1RQJ8 604 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ATP2A1O14983 1001 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PRLRP16471 622 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SP100P23497 879 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 AMPD2Q01433 879 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CYP4A11Q02928 519 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 MCL1Q07820 350 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 TBC1D25Q3MII6 688 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF554Q86TJ5 538 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ERP27Q96DN0 273 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 MS4A14Q96JA4 679 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 MPP4Q96JB8 637 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PPP1R16BQ96T49 567 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 LBHD1Q9BQE6 289 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 SPZ1Q9BXG8 430 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 ISCUQ9H1K1 167 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PREBQ9HCU5 417 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PALMDQ9NP74 551 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 IL17RBQ9NRM6 502 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 CAPN11Q9UMQ6 739 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 TFR2Q9UP52 801 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 TRAF3IP3Q9Y228 551 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 PKD1L3Q7Z443 1732 aa7.24□□□□□ -1.25
TGFBR3-209ENST00000532540 DAPK3O43293 454 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms