RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 FAM43BQ6ZT52 329 aaPredicted RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 MOB2Q70IA6 237 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 PRRT2Q7Z6L0 340 aaPredicted RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 TRIM58Q8NG06 486 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 ASIC3Q9UHC3 531 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 RPTORQ8N122 1335 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 ACADSBP45954 432 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 STOX1Q6ZVD7 989 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 ENOX1Q8TC92 643 aaKnown RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 SH3BP5O60239 455 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 TDRD10Q5VZ19 366 aaKnown RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 DDX20Q9UHI6 824 aaKnown RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 PRG3Q9Y2Y8 225 aaPredicted RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 KIAA0754O94854 1291 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 TAP1Q03518 808 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 KCNB1Q14721 858 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 MGAT5BQ3V5L5 792 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 MED15Q96RN5 788 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 CDK5RAP1Q96SZ6 601 aaKnown RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 TSPYL1Q9H0U9 437 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 CACYBPQ9HB71 228 aaKnown RBP12.47□□□□□ -0.41
CSRP1-215ENST00000532313 SRRDQ9UH36 339 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
CSRP1-215ENST00000532313 SEPT4O43236 478 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 PGBD3Q8N328 593 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 ZNF668Q96K58 619 aaPredicted RBP12.46□□□□□ -0.41
CSRP1-215ENST00000532313 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 MSH4O15457 936 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 INSRRP14616 1297 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 CCDC144BQ3MJ40 725 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 KIAA1755Q5JYT7 1200 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 ZNF558Q96NG5 402 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 SEPT5Q99719 369 aaPredicted RBP12.46□□□□□ -0.41
CSRP1-215ENST00000532313 TRPC7Q9HCX4 862 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 LZTFL1Q9NQ48 299 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.46□□□□□ -0.41
CSRP1-215ENST00000532313 HOMER3Q9NSC5 361 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 CYP39A1Q9NYL5 469 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 U2AF2P26368 475 aaKnown RBP eCLIP12.46□□□□□ -0.41
CSRP1-215ENST00000532313 SDC4P31431 198 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 ADCYAP1R1P41586 468 aa12.46□□□□□ -0.41
CSRP1-215ENST00000532313 PSRC1Q6PGN9 363 aaPredicted RBP12.46□□□□□ -0.41
CSRP1-215ENST00000532313 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.41
CSRP1-215ENST00000532313 H7C0C1 242 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 EXTL3O43909 919 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 GJB1P08034 283 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 ATP5OP48047 213 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 CELF3Q5SZQ8 465 aaKnown RBP12.46□□□□□ -0.42
CSRP1-215ENST00000532313 RFX6Q8HWS3 928 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 CCDC105Q8IYK2 499 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 ATP2A3Q93084 1043 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 PRIMPOLQ96LW4 560 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 NAPGQ99747 312 aaPredicted RBP12.46□□□□□ -0.42
CSRP1-215ENST00000532313 DNAI1Q9UI46 699 aa12.46□□□□□ -0.42
CSRP1-215ENST00000532313 OGTO15294 1046 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 SETD4Q9NVD3 440 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 SEPT10Q9P0V9 454 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 DBR1Q9UK59 544 aaKnown RBP12.45□□□□□ -0.42
CSRP1-215ENST00000532313 AFG3L2Q9Y4W6 797 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 SNX9Q9Y5X1 595 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 ZC3H11AO75152 810 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSRP1-215ENST00000532313 FGBP02675 491 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 INHAP05111 366 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 HSPA6P17066 643 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 CFAP221Q4G0U5 840 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 CCDC149Q6ZUS6 474 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 FRMD5Q7Z6J6 570 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 ADGRA1Q86SQ6 560 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 NDST4Q9H3R1 872 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 UNC45AQ9H3U1 944 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 MAN1B1Q9UKM7 699 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 M0QYV0 167 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 CEP104O60308 925 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 MPZL3Q6UWV2 235 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 C12orf42Q96LP6 360 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 C16orf45Q96MC5 204 aaPredicted RBP12.45□□□□□ -0.42
CSRP1-215ENST00000532313 C11orf49Q9H6J7 331 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 ANTXR2P58335 489 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 PAN2Q504Q3 1202 aaKnown RBP12.45□□□□□ -0.42
CSRP1-215ENST00000532313 BTNL9Q6UXG8 535 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 NT5DC4Q86YG4 428 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 TTC25Q96NG3 672 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 RAB17Q9H0T7 212 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 MFSD1Q9H3U5 465 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 WDR35Q9P2L0 1181 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 ADCY6O43306 1168 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 LGALS2P05162 132 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 MYBL1P10243 752 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 COL16A1Q07092 1604 aaPredicted RBP12.45□□□□□ -0.42
CSRP1-215ENST00000532313 TFDP2Q14188 446 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 UROC1Q96N76 676 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 EDEM3Q9BZQ6 932 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 HIPK3Q9H422 1215 aa12.45□□□□□ -0.42
CSRP1-215ENST00000532313 NFASCO94856 1347 aa12.44□□□□□ -0.42
CSRP1-215ENST00000532313 MCF2LO15068 1137 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms