RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 POLR3BQ9NW08 1133 aaPredicted RBP3.76□□□□□ -1.81
CD44-234ENST00000531873 MAGEL2Q9UJ55 1249 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 SIK3Q9Y2K2 1263 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 STXBP5LQ9Y2K9 1186 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 PCDHB1Q9Y5F3 818 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 PCDHA5Q9Y5H7 936 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 NR2E3Q9Y5X4 410 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 CFAP20Q9Y6A4 193 aaKnown RBP3.76□□□□□ -1.81
CD44-234ENST00000531873 CAPN8A6NHC0 703 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 LRRC14BA6NHZ5 514 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 LY86O95711 162 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 CYP2C8P10632 490 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 NCAM1P13591 858 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 GSPT1P15170 499 aaKnown RBP3.75□□□□□ -1.81
CD44-234ENST00000531873 IGFBP6P24592 240 aaPredicted RBP3.75□□□□□ -1.81
CD44-234ENST00000531873 PEX2P28328 305 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 ADCY8P40145 1251 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 AK2P54819 239 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 RAB1AP62820 205 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 CD69Q07108 199 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 DGKDQ16760 1214 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 MST1LQ2TV78 715 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 GRAMD1BQ3KR37 738 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 GRAMD4Q6IC98 578 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 APOA5Q6Q788 366 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 MIGA2Q7L4E1 593 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 SRLQ86TD4 932 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 STK32CQ86UX6 486 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 KRT78Q8N1N4 520 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 PIK3C3Q8NEB9 887 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 KLHDC4Q8TBB5 520 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 RAB24Q969Q5 203 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 RGMAQ96B86 450 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 DYDC2Q96IM9 177 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 SAMD11Q96NU1 681 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 NT5C1BQ96P26 610 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 DMRTA2Q96SC8 542 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 C22orf23Q9BZE7 217 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 ZNF552Q9H707 407 aaPredicted RBP3.75□□□□□ -1.81
CD44-234ENST00000531873 ATP6V0A4Q9HBG4 840 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 NLRC4Q9NPP4 1024 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 DNAI1Q9UI46 699 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 MBD1Q9UIS9 605 aaPredicted RBP3.75□□□□□ -1.81
CD44-234ENST00000531873 PCDHA13Q9Y5I0 950 aa3.75□□□□□ -1.81
CD44-234ENST00000531873 A0A088AWK7 358 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 MYOCOSA0A1B0GUC4 107 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 KLRG2A4D1S0 409 aaPredicted RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 GOLIM4O00461 696 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 SGTAO43765 313 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 FOXD2O60548 495 aaPredicted RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 PQBP1O60828 265 aaKnown RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 KNG1P01042 644 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 FTLP02792 175 aaPredicted RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 XPAP23025 273 aaPredicted RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 GLDCP23378 1020 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 CTSSP25774 331 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 TRAPPC10P48553 1259 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 CDR1P51861 262 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 HK3P52790 923 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 CACNB3P54284 484 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 NCKAP1LP55160 1127 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 NRG3P56975 720 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 KRTAP10-2P60368 255 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 MEF2AQ02078 507 aaPredicted RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 MAP3K12Q12852 859 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 TARDBPQ13148 414 aaKnown RBP eCLIP3.74□□□□□ -1.81
CD44-234ENST00000531873 NOGQ13253 232 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 NOMO1Q15155 1222 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 RNF220Q5VTB9 566 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 OLFML2BQ68BL8 750 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 DARS2Q6PI48 645 aaKnown RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 MPZL3Q6UWV2 235 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 ABHD15Q6UXT9 468 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 Q6ZVL8 140 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 MAEAQ7L5Y9 396 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 CXXC5Q7LFL8 322 aaKnown RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 B3GNT8Q7Z7M8 397 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 ZNF605Q86T29 641 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 FAM129CQ86XR2 697 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 LILRA3Q8N6C8 439 aaPredicted RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 VPS37AQ8NEZ2 397 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 GPR156Q8NFN8 814 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.74□□□□□ -1.81
CD44-234ENST00000531873 LRTOMTQ8WZ04 291 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 MRGPRX4Q96LA9 322 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 SGCZQ96LD1 299 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 NOX5Q96PH1 765 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 PTPN18Q99952 460 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 C11orf84Q9BUA3 381 aaPredicted RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 CNTD2Q9H8S5 307 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 ZMAT3Q9HA38 289 aaKnown RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 PARD6AQ9NPB6 346 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 PLCB1Q9NQ66 1216 aa3.74□□□□□ -1.81
CD44-234ENST00000531873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 PUF60Q9UHX1 559 aaKnown RBP3.74□□□□□ -1.81
CD44-234ENST00000531873 A0A0G2JNJ9 132 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 ABHD14A-ACY1A0A1B0GW23 586 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 FAM171A2A8MVW0 826 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 RASA4BC9J798 803 aa3.73□□□□□ -1.81
CD44-234ENST00000531873 MAFGO15525 162 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms