RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 FSTL1Q12841 308 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 GFOD2Q3B7J2 385 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 INAVAQ3KP66 663 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 CXorf57Q6NSI4 855 aaKnown RBP5.71□□□□□ -1.5
USP47-211ENST00000531513 CC2D1AQ6P1N0 951 aaPredicted RBP5.71□□□□□ -1.5
USP47-211ENST00000531513 C11orf74Q86VG3 221 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 MAGEB6Q8N7X4 407 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 CHST14Q8NCH0 376 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 OR5AN1Q8NGI8 311 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 CHTF18Q8WVB6 975 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 SLC39A13Q96H72 371 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 FUBP3Q96I24 572 aaKnown RBP eCLIP5.71□□□□□ -1.5
USP47-211ENST00000531513 RPL10LQ96L21 214 aaKnown RBP5.71□□□□□ -1.5
USP47-211ENST00000531513 FOXB1Q99853 325 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 BOCQ9BWV1 1114 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 NRDE2Q9H7Z3 1164 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 EMC7Q9NPA0 242 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 SPTLC3Q9NUV7 552 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 THG1LQ9NWX6 298 aaKnown RBP5.71□□□□□ -1.5
USP47-211ENST00000531513 IP6K2Q9UHH9 426 aa5.71□□□□□ -1.5
USP47-211ENST00000531513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 C2orf78A6NCI8 922 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 H2AFYO75367 372 aaKnown RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 ATP2A2P16615 1042 aaKnown RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 CCND1P24385 295 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 KPNA1P52294 538 aaPredicted RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 SESN2P58004 480 aaPredicted RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 BPIFB4P59827 614 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 ERVK-21P61565 698 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 TCIRG1Q13488 830 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 ELAVL1Q15717 326 aaKnown RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 ARHGAP44Q17R89 818 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 ABCB5Q2M3G0 1257 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 ANKRD53Q8N9V6 530 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 GCDHQ92947 438 aaPredicted RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 SLC13A1Q9BZW2 595 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 TCF7L1Q9HCS4 588 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 VTA1Q9NP79 307 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 SAE1Q9UBE0 346 aaPredicted RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 DENND2AQ9ULE3 1009 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 RBM8AQ9Y5S9 174 aaKnown RBP5.7□□□□□ -1.5
USP47-211ENST00000531513 COMMD10Q9Y6G5 202 aa5.7□□□□□ -1.5
USP47-211ENST00000531513 TMEM191CA6NGB0 347 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 DVL2O14641 736 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 FAM20BO75063 409 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 SNUPNO95149 360 aaKnown RBP5.69□□□□□ -1.5
USP47-211ENST00000531513 U2AF1L5P0DN76 240 aaPredicted RBP5.69□□□□□ -1.5
USP47-211ENST00000531513 MYBL2P10244 700 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 FNTBP49356 437 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 SESN3P58005 492 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 U2AF1Q01081 240 aaKnown RBP eCLIP5.69□□□□□ -1.5
USP47-211ENST00000531513 KLF1Q13351 362 aaPredicted RBP5.69□□□□□ -1.5
USP47-211ENST00000531513 OS9Q13438 667 aaPredicted RBP5.69□□□□□ -1.5
USP47-211ENST00000531513 LAIR1Q6GTX8 287 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 PPP4R4Q6NUP7 873 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 DPY19L2P1Q6NXN4 242 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 DGKHQ86XP1 1220 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 GFM2Q969S9 779 aaKnown RBP5.69□□□□□ -1.5
USP47-211ENST00000531513 AHCYL2Q96HN2 611 aaKnown RBP5.69□□□□□ -1.5
USP47-211ENST00000531513 GPR87Q9BY21 358 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 ZNF700Q9H0M5 742 aa5.69□□□□□ -1.5
USP47-211ENST00000531513 LUC7L2Q9Y383 392 aaKnown RBP5.69□□□□□ -1.5
USP47-211ENST00000531513 PTPDC1A2A3K4 754 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 PRLP01236 227 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 BMP5P22003 454 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 PTGS2P35354 604 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 IARSP41252 1262 aaKnown RBP5.68□□□□□ -1.5
USP47-211ENST00000531513 RGS3P49796 1198 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 ANTXR2P58335 489 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 SYCP2LQ5T4T6 812 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 FAM111BQ6SJ93 734 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 SLC4A10Q6U841 1118 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 HDGFL2Q7Z4V5 671 aaPredicted RBP5.68□□□□□ -1.5
USP47-211ENST00000531513 MRGPREQ86SM8 312 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 SAMD3Q8N6K7 520 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 NKD2Q969F2 451 aaPredicted RBP5.68□□□□□ -1.5
USP47-211ENST00000531513 WDR26Q9H7D7 661 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 IL23AQ9NPF7 189 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 CHST12Q9NRB3 414 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 ANKRD6Q9Y2G4 727 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 TNFRSF18Q9Y5U5 241 aa5.68□□□□□ -1.5
USP47-211ENST00000531513 UBE2QL1A1L167 161 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 KLRG2A4D1S0 409 aaPredicted RBP5.67□□□□□ -1.5
USP47-211ENST00000531513 GOLGA8BA8MQT2 603 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 FZD9O00144 591 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 MT-CO1P00395 513 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 CT47B1P0C2W7 299 aaPredicted RBP5.67□□□□□ -1.5
USP47-211ENST00000531513 RECQLP46063 649 aaPredicted RBP5.67□□□□□ -1.5
USP47-211ENST00000531513 RABGGTBP53611 331 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 SLC6A3Q01959 620 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 PCBP2Q15366 365 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP47-211ENST00000531513 TPH2Q8IWU9 490 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 GSPT2Q8IYD1 628 aaKnown RBP5.67□□□□□ -1.5
USP47-211ENST00000531513 CPA6Q8N4T0 437 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 SLC25A43Q8WUT9 341 aaPredicted RBP5.67□□□□□ -1.5
USP47-211ENST00000531513 SLC5A5Q92911 643 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 FAXDC2Q96IV6 333 aa5.67□□□□□ -1.5
USP47-211ENST00000531513 TCF25Q9BQ70 676 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms