RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 GDAQ9Y2T3 454 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 BIN1O00499 593 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 N4BP3O15049 544 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 EFCAB14O75071 495 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 BAIAP3O94812 1187 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 KIF20AO95235 890 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 HOXD13P35453 343 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 MYOCDQ8IZQ8 938 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 GUF1Q8N442 669 aaKnown RBP18.57■□□□□ 0.56
SF3B2-211ENST00000531041 LINC01599Q8WXQ3 324 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 BICD1Q96G01 975 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.561e-10■□□□□ 11.3
SF3B2-211ENST00000531041 PTPRHQ9HD43 1115 aa18.57■□□□□ 0.56
SF3B2-211ENST00000531041 ENPP3O14638 875 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 HNRNPDLO14979 420 aaKnown RBP18.56■□□□□ 0.56
SF3B2-211ENST00000531041 TOM1L1O75674 476 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 BMP6P22004 513 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 PROZP22891 400 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 KNOP1Q1ED39 458 aaKnown RBP18.56■□□□□ 0.56
SF3B2-211ENST00000531041 TMEM132AQ24JP5 1023 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 ISM2Q6H9L7 571 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 TWF2Q6IBS0 349 aaKnown RBP18.56■□□□□ 0.56
SF3B2-211ENST00000531041 SLC27A1Q6PCB7 646 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 SYCP3Q8IZU3 236 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 PDZD7Q9H5P4 517 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 C1orf112Q9NSG2 853 aa18.56■□□□□ 0.56
SF3B2-211ENST00000531041 ZMYM2Q9UBW7 1377 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 ANK1P16157 1881 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 FNDC1Q4ZHG4 1894 aaPredicted RBP18.55■□□□□ 0.56
SF3B2-211ENST00000531041 PRCPP42785 496 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 LIG4P49917 911 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 SLC39A4Q6P5W5 647 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 SLC24A5Q71RS6 500 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 OTOP2Q7RTS6 562 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 SMYD4Q8IYR2 804 aaPredicted RBP18.55■□□□□ 0.56
SF3B2-211ENST00000531041 HERVK_113Q902F9 699 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 ADPGKQ9BRR6 497 aa18.55■□□□□ 0.56
SF3B2-211ENST00000531041 PDCD11Q14690 1871 aaKnown RBP18.54■□□□□ 0.56
SF3B2-211ENST00000531041 RALGAPA2Q2PPJ7 1873 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 GBF1Q92538 1859 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 TDRD15B5MCY1 1934 aaKnown RBP18.54■□□□□ 0.56
SF3B2-211ENST00000531041 A0A0U1RQF3 1178 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.54■□□□□ 0.56
SF3B2-211ENST00000531041 C9IYK1 514 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 ANKRD63C9JTQ0 380 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 ABLIM1O14639 778 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 PPP1R2P41236 205 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 SNRPFP62306 86 aaKnown RBP18.54■□□□□ 0.56
SF3B2-211ENST00000531041 FAM189BP81408 668 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 UBXN11Q5T124 520 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 EEF1DP3Q658K8 133 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 MPZL3Q6UWV2 235 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 APBB1IPQ7Z5R6 666 aaPredicted RBP18.54■□□□□ 0.56
SF3B2-211ENST00000531041 CDR2LQ86X02 465 aaPredicted RBP18.54■□□□□ 0.56
SF3B2-211ENST00000531041 NELFCDQ8IXH7 590 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 ZBTB45Q96K62 511 aaPredicted RBP18.54■□□□□ 0.56
SF3B2-211ENST00000531041 GBP3Q9H0R5 595 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 IKZF4Q9H2S9 585 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 KCTD10Q9H3F6 313 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 FAM105AQ9NUU6 356 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 MAPK8IP1Q9UQF2 711 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 STYXL1Q9Y6J8 313 aa18.54■□□□□ 0.56
SF3B2-211ENST00000531041 CLDN3O15551 220 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 TGFB1I1O43294 461 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 ZNF623O75123 536 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 LETM1O95202 739 aaPredicted RBP18.53■□□□□ 0.56
SF3B2-211ENST00000531041 SKIP12755 728 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 BMP8BP34820 402 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 RAB27AP51159 221 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 MCL1Q07820 350 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 DCAF4L1Q3SXM0 396 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 SLFN12LQ6IEE8 588 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 ADSSL1Q8N142 457 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 TCHPQ9BT92 498 aa18.53■□□□□ 0.56
SF3B2-211ENST00000531041 EIF2AQ9BY44 585 aaKnown RBP18.53■□□□□ 0.56
SF3B2-211ENST00000531041 CGNQ9P2M7 1197 aaKnown RBP18.53■□□□□ 0.56
SF3B2-211ENST00000531041 PDXKO00764 312 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 MCF2P10911 925 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 NLRP12P59046 1061 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 WDR5P61964 334 aaKnown RBP18.52■□□□□ 0.56
SF3B2-211ENST00000531041 STIM1Q13586 685 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 ZNF568Q3ZCX4 644 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 RASIP1Q5U651 963 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.52■□□□□ 0.56
SF3B2-211ENST00000531041 HS2ST1Q7LGA3 356 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 MLKLQ8NB16 471 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 TRIM6Q9C030 488 aaPredicted RBP18.52■□□□□ 0.56
SF3B2-211ENST00000531041 UBE2OQ9C0C9 1292 aaKnown RBP18.52■□□□□ 0.56
SF3B2-211ENST00000531041 HAPLN2Q9GZV7 340 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 CDT1Q9H211 546 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 MTIF3Q9H2K0 278 aaKnown RBP18.52■□□□□ 0.56
SF3B2-211ENST00000531041 TYW1Q9NV66 732 aaKnown RBP18.52■□□□□ 0.56
SF3B2-211ENST00000531041 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
SF3B2-211ENST00000531041 ANKFY1Q9P2R3 1169 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 PCDHB2Q9Y5E7 798 aa18.52■□□□□ 0.56
SF3B2-211ENST00000531041 A0A0B4J269 797 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 PPP1R3GB7ZBB8 358 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 TISP43B9A030 160 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 NPTXRO95502 500 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 EOMESO95936 686 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms