RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 NCBP1Q09161 790 aaKnown RBP20.64■□□□□ 0.89
GMDS-208ENST00000530927 DMP1Q13316 513 aaPredicted RBP20.64■□□□□ 0.89
GMDS-208ENST00000530927 TMEM132AQ24JP5 1023 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 TCEAL5Q5H9L2 206 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 SLC27A1Q6PCB7 646 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 KCNT2Q6UVM3 1135 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 TMEM173Q86WV6 379 aaPredicted RBP20.64■□□□□ 0.89
GMDS-208ENST00000530927 ZNF280BQ86YH2 543 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 THNSL1Q8IYQ7 743 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 POF1BQ8WVV4 589 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 LARP4BQ92615 738 aaKnown RBP20.64■□□□□ 0.89
GMDS-208ENST00000530927 P2RX5Q93086 422 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 PGBD4Q96DM1 585 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 ZFP42Q96MM3 310 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 GAD1Q99259 594 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 KMT5AQ9NQR1 393 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 MIOSQ9NXC5 875 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 LMCD1Q9NZU5 365 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 KLK14Q9P0G3 267 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 MYH11P35749 1972 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 MYO7AQ13402 2215 aa20.64■□□□□ 0.89
GMDS-208ENST00000530927 SLC26A4O43511 780 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 ZC3H11AO75152 810 aaKnown RBP eCLIP20.63■□□□□ 0.894e-6■■■■□ 21.6
GMDS-208ENST00000530927 BRD1O95696 1058 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 ITGA4P13612 1032 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 LAG3P18627 525 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 GTF2F1P35269 517 aaKnown RBP eCLIP20.63■□□□□ 0.892e-6■■■□□ 19.1
GMDS-208ENST00000530927 MLH1P40692 756 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 CCDC51Q96ER9 411 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 PRIMPOLQ96LW4 560 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 TRIM6Q9C030 488 aaPredicted RBP20.63■□□□□ 0.89
GMDS-208ENST00000530927 NRDE2Q9H7Z3 1164 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 ARHGAP28Q9P2N2 729 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 PCDHB12Q9Y5F1 795 aa20.63■□□□□ 0.89
GMDS-208ENST00000530927 MORC2Q9Y6X9 1032 aaPredicted RBP20.63■□□□□ 0.89
GMDS-208ENST00000530927 DDHD2O94830 711 aa20.62■□□□□ 0.89
GMDS-208ENST00000530927 PLS3P13797 630 aa20.62■□□□□ 0.89
GMDS-208ENST00000530927 BCAR1P56945 870 aa20.62■□□□□ 0.89
GMDS-208ENST00000530927 GIT2Q14161 759 aa20.62■□□□□ 0.89
GMDS-208ENST00000530927 PTPROQ16827 1216 aa20.62■□□□□ 0.89
GMDS-208ENST00000530927 KCTD17Q8N5Z5 321 aa20.62■□□□□ 0.89
GMDS-208ENST00000530927 PDILTQ8N807 584 aa20.62■□□□□ 0.89
GMDS-208ENST00000530927 BCL7CQ8WUZ0 217 aaPredicted RBP20.62■□□□□ 0.89
GMDS-208ENST00000530927 ARL5CA6NH57 179 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 K7ERI5 159 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 PPP6R2O75170 966 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 YEATS4O95619 227 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 DDIT3P35638 169 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 ERVFC1P60507 584 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 RRAGBQ5VZM2 374 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 SHC4Q6S5L8 630 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 ADGRD2Q7Z7M1 963 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 ZNF558Q96NG5 402 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 TIPINQ9BVW5 301 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 TARS2Q9BW92 718 aaKnown RBP20.61■□□□□ 0.89
GMDS-208ENST00000530927 MRPL9Q9BYD2 267 aaKnown RBP20.61■□□□□ 0.89
GMDS-208ENST00000530927 AAASQ9NRG9 546 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 SNTG2Q9NY99 539 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 PHLPP2Q6ZVD8 1323 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 N4BP3O15049 544 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 SLC11A1P49279 550 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 SCNN1GP51170 649 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 EFNA5P52803 228 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 RNASELQ05823 741 aaKnown RBP20.61■□□□□ 0.89
GMDS-208ENST00000530927 AXDND1Q5T1B0 1012 aaPredicted RBP20.61■□□□□ 0.89
GMDS-208ENST00000530927 ATF7IP2Q5U623 682 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 DYMQ7RTS9 669 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 TMEM161BQ8NDZ6 487 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 ZHX3Q9H4I2 956 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 KCND2Q9NZV8 630 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 CACNG4Q9UBN1 327 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 CCDC39Q9UFE4 941 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 PARP2Q9UGN5 583 aa20.61■□□□□ 0.89
GMDS-208ENST00000530927 F8W810 466 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 KRT18P05783 430 aaKnown RBP20.6■□□□□ 0.89
GMDS-208ENST00000530927 SLC39A11Q8N1S5 342 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 CEP120Q8N960 986 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 GSTCDQ8NEC7 633 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 URGCPQ8TCY9 931 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 STAMQ92783 540 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 ZBTB45Q96K62 511 aaPredicted RBP20.6■□□□□ 0.89
GMDS-208ENST00000530927 ACO2Q99798 780 aaKnown RBP20.6■□□□□ 0.89
GMDS-208ENST00000530927 LMAN2LQ9H0V9 348 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 NSUN3Q9H649 340 aaKnown RBP20.6■□□□□ 0.89
GMDS-208ENST00000530927 TMEM134Q9H6X4 195 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 THEGQ9P2T0 379 aa20.6■□□□□ 0.89
GMDS-208ENST00000530927 MYMKA6NI61 221 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 GALTP07902 379 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 MAPTP10636 758 aaKnown RBP20.59■□□□□ 0.89
GMDS-208ENST00000530927 TXLNAP40222 546 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 HYAL1Q12794 435 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 TIGD5Q53EQ6 642 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 ZBTB33Q86T24 672 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 MYCT1Q8N699 235 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 CNNM3Q8NE01 707 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 SPIRE2Q8WWL2 714 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 RABGGTAQ92696 567 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 NTPCRQ9BSD7 190 aaKnown RBP20.59■□□□□ 0.89
GMDS-208ENST00000530927 C17orf75Q9HAS0 396 aa20.59■□□□□ 0.89
GMDS-208ENST00000530927 PCDHA7Q9UN72 937 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms