RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 MXRA8Q9BRK3 442 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ZNF577Q9BSK1 485 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 DESI2Q9BSY9 194 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ZNF341Q9BYN7 854 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 GSX2Q9BZM3 304 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 TMEM39BQ9GZU3 492 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 GBP3Q9H0R5 595 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 NHEJ1Q9H9Q4 299 aaPredicted RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 PARVGQ9HBI0 331 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 SLC38A10Q9HBR0 1119 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 LZTFL1Q9NQ48 299 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ARMCX3Q9UH62 379 aaPredicted RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 TCEAL9Q9UHQ7 104 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 KCNG1Q9UIX4 513 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 ZNF112Q9UJU3 913 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 DDX41Q9UJV9 622 aaKnown RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 CCPG1Q9ULG6 757 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 PPP1R9AQ9ULJ8 1098 aa6.1□□□□□ -1.43
PCF11-205ENST00000530906 CTDP1Q9Y5B0 961 aaPredicted RBP6.1□□□□□ -1.43
PCF11-205ENST00000530906 CTAGE15A4D2H0 777 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 CCDC151A5D8V7 595 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 ARHGEF35A5YM69 484 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 BTNL10A8MVZ5 291 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 FZD9O00144 591 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 NFKBIEO00221 500 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 MAPK13O15264 365 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 N4BP1O75113 896 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 TACC1O75410 805 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 ERLIN1O75477 346 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 SLITRK3O94933 977 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 SERPING1P05155 500 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 P4HBP07237 508 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 H2AFB1P0C5Y9 115 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 H2AFB2P0C5Z0 115 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 CCDC172P0C7W6 258 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 CTAGE8P0CG41 777 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 EPB41P11171 864 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 XRCC5P13010 732 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 NR2F2P24468 414 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 HOXA13P31271 388 aaPredicted RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 AFF1P51825 1210 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 JAK3P52333 1124 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 CHMP4BP1P59074 171 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 ENPEPQ07075 957 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 PABPC4Q13310 644 aaKnown RBP eCLIP6.09□□□□□ -1.43
PCF11-205ENST00000530906 ELF2Q15723 593 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 IFI16Q16666 785 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 SHROOM1Q2M3G4 852 aaPredicted RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 NOL9Q5SY16 702 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 CCDC122Q5T0U0 273 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 ARTNQ5T4W7 220 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 SFMBT2Q5VUG0 894 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 PAPD7Q5XG87 772 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 RINT1Q6NUQ1 792 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 TMCO3Q6UWJ1 677 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 C1orf186Q6ZWK4 172 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 CTAGE6Q86UF2 777 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 VPS36Q86VN1 386 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 SFR1Q86XK3 245 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 CTAGE4Q8IX94 777 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 SCYL3Q8IZE3 742 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 ACRBPQ8NEB7 543 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 FBXO41Q8TF61 875 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 HNRNPLLQ8WVV9 542 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 SECISBP2LQ93073 1101 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 HVCN1Q96D96 273 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 CDHR1Q96JP9 859 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 CALR3Q96L12 384 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 P2RX7Q99572 595 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 CARD6Q9BX69 1037 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 IFIH1Q9BYX4 1025 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 TANGO6Q9C0B7 1094 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 UBE2OQ9C0C9 1292 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 BHMT2Q9H2M3 363 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 DEF6Q9H4E7 631 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 ST6GALNAC4Q9H4F1 302 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 ZSWIM4Q9H7M6 989 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 MMRN2Q9H8L6 949 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 EFCC1Q9HA90 598 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 C17orf75Q9HAS0 396 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 PICK1Q9NRD5 415 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 AGPAT5Q9NUQ2 364 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 AIPL1Q9NZN9 384 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 LARSQ9P2J5 1176 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 RNF14Q9UBS8 474 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 DMGDHQ9UI17 866 aaKnown RBP6.09□□□□□ -1.43
PCF11-205ENST00000530906 NAGPAQ9UK23 515 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 JRKLQ9Y4A0 524 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 UBIAD1Q9Y5Z9 338 aa6.09□□□□□ -1.43
PCF11-205ENST00000530906 PARP14Q460N5 1801 aa6.09□□□□□ -1.44
PCF11-205ENST00000530906 ZNF536O15090 1300 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 DICER1Q9UPY3 1922 aaKnown RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 SCO2A0A1W2PP80 73 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 TARSL2A2RTX5 802 aaKnown RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 RASSF10A6NK89 507 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 FANCGO15287 622 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 P4HA2O15460 535 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 AKR1B10O60218 316 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 COBLO75128 1261 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 AFPP02771 609 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms