RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 STK38Q15208 465 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 ARSHQ5FYA8 562 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 TCEAL5Q5H9L2 206 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 HACE1Q8IYU2 909 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 KRI1Q8N9T8 703 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 LINC00301Q8NCQ3 95 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 RAD54LQ92698 747 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 SYMPKQ92797 1274 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 HLA-CQ95604 372 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 RNF39Q9H2S5 420 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 NXF3Q9H4D5 531 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 PDZD7Q9H5P4 517 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 KANSL3Q9P2N6 904 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 TFIP11Q9UBB9 837 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 CCDC39Q9UFE4 941 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 KCNG1Q9UIX4 513 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 RBM19Q9Y4C8 960 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 HES2Q9Y543 173 aa16.47■□□□□ 0.23
PPFIA1-216ENST00000530746 PHLPP2Q6ZVD8 1323 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 TRIP11Q15643 1979 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 CARNS1A5YM72 827 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 ZC3H11AO75152 810 aaKnown RBP eCLIP16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 CSPG5O95196 566 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 EDN1P05305 212 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 PLS3P13797 630 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 DDIT3P35638 169 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 TXLNAP40222 546 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 AFF1P51825 1210 aaKnown RBP16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 MRPS5P82675 430 aaKnown RBP16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 PKP1Q13835 747 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 MCM6Q14566 821 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 GPBP1Q86WP2 473 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 SPIRE2Q8WWL2 714 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 MRPS27Q92552 414 aaKnown RBP16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 LARP4BQ92615 738 aaKnown RBP16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 TMEM134Q9H6X4 195 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 NRDE2Q9H7Z3 1164 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 TLR9Q9NR96 1032 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 SPG21Q9NZD8 308 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 ARHGAP28Q9P2N2 729 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 DAXXQ9UER7 740 aaPredicted RBP16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 ODF2LQ9ULJ1 636 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 LZTS1Q9Y250 596 aa16.46■□□□□ 0.23
PPFIA1-216ENST00000530746 NPHP3-ACAD11A0A0J9YXS1 232 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 ARL5CA6NH57 179 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 SPTLC2O15270 562 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 INPPL1O15357 1258 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 PPP6R2O75170 966 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 YEATS4O95619 227 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 IRS1P35568 1242 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 MLH1P40692 756 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 TFF2Q03403 129 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 KRT17Q04695 432 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 NT5DC1Q5TFE4 455 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 ZNF280BQ86YH2 543 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 SLC39A11Q8N1S5 342 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 ASB2Q96Q27 587 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 GAD1Q99259 594 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 REEP2Q9BRK0 252 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 ADPGKQ9BRR6 497 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 APOL6Q9BWW8 343 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 LARSQ9P2J5 1176 aaKnown RBP16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 STK17AQ9UEE5 414 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 PUF60Q9UHX1 559 aaKnown RBP16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 USP20Q9Y2K6 914 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 GIT1Q9Y2X7 761 aa16.45■□□□□ 0.22
PPFIA1-216ENST00000530746 TCF20Q9UGU0 1960 aaKnown RBP16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 ZMYM2Q9UBW7 1377 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 SLC16A4O15374 487 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 DDHD2O94830 711 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 POMCP01189 267 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 GALTP07902 379 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 AKAP5P24588 427 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 SMTNP53814 917 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 AAK1Q2M2I8 961 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 TJAP1Q5JTD0 557 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 ATF7IP2Q5U623 682 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 TAS1R3Q7RTX0 852 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 MICAL1Q8TDZ2 1067 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 PPP2R3CQ969Q6 453 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 ZFP42Q96MM3 310 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 FAM193BQ96PV7 902 aaPredicted RBP16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 GBP3Q9H0R5 595 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 DNAJB4Q9UDY4 337 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 TNFSF13BQ9Y275 285 aa16.44■□□□□ 0.22
PPFIA1-216ENST00000530746 NT5C1B-RDH14C9J2C7 533 aa16.43■□□□□ 0.22
PPFIA1-216ENST00000530746 NCK2O43639 380 aa16.43■□□□□ 0.22
PPFIA1-216ENST00000530746 B4GALT3O60512 393 aa16.43■□□□□ 0.22
PPFIA1-216ENST00000530746 KRT18P05783 430 aaKnown RBP16.43■□□□□ 0.22
PPFIA1-216ENST00000530746 ERVFC1P60507 584 aa16.43■□□□□ 0.22
PPFIA1-216ENST00000530746 HYAL1Q12794 435 aa16.43■□□□□ 0.22
PPFIA1-216ENST00000530746 GIT2Q14161 759 aa16.43■□□□□ 0.22
PPFIA1-216ENST00000530746 BECN1Q14457 450 aa16.43■□□□□ 0.22
PPFIA1-216ENST00000530746 COL19A1Q14993 1142 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms