RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 PLAGL2Q9UPG8 496 aa5.18□□□□□ -1.58
CTNND1-226ENST00000530720 RBM8AQ9Y5S9 174 aaKnown RBP5.18□□□□□ -1.58
CTNND1-226ENST00000530720 ZNF318Q5VUA4 2279 aa5.18□□□□□ -1.58
CTNND1-226ENST00000530720 IGSF9BQ9UPX0 1349 aa5.18□□□□□ -1.58
CTNND1-226ENST00000530720 ERICH2A1L162 156 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 SLC27A2O14975 620 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PRC1O43663 620 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 ATG7O95352 703 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 EYA4O95677 639 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 ARP10275 920 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 LIFRP42702 1097 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 NHLH1Q02575 133 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 TMEM62Q0P6H9 643 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 SMAD4Q13485 552 aaKnown RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 MTMR1Q13613 665 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 KCNC3Q14003 757 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 BTG3Q14201 252 aaPredicted RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PLCB4Q15147 1175 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 NECTIN1Q15223 517 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PCSK7Q16549 785 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 HERC4Q5GLZ8 1057 aaPredicted RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 WWC2Q6AWC2 1192 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 NLRX1Q86UT6 975 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 CMTR2Q8IYT2 770 aaKnown RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 DTWD1Q8N5C7 304 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 KLHL23Q8NBE8 558 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 SMRP1Q8NCR6 262 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 GIMAP8Q8ND71 665 aaPredicted RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 CTCFLQ8NI51 663 aaPredicted RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 P2RX5Q93086 422 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 RRP36Q96EU6 259 aaKnown RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PGBD1Q96JS3 809 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 LRRC2Q9BYS8 371 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 FAM49AQ9H0Q0 323 aaPredicted RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 SMARCAD1Q9H4L7 1026 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PSTPIP2Q9H939 334 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 AGO4Q9HCK5 861 aaKnown RBP5.17□□□□□ -1.58
CTNND1-226ENST00000530720 ERVK-5Q9HDB9 667 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 KCNH7Q9NS40 1196 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 FRRS1LQ9P0K9 344 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PADI3Q9ULW8 664 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PCDHA6Q9UN73 950 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PCDHA8Q9Y5H6 950 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 PCDHA2Q9Y5H9 948 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 SQORQ9Y6N5 450 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 NFASCO94856 1347 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 KDM3AQ9Y4C1 1321 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 MYO15AQ9UKN7 3530 aa5.17□□□□□ -1.58
CTNND1-226ENST00000530720 TECTAO75443 2155 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 IGLV3-22A0A075B6J6 115 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 LOC730098B7Z3J9 87 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 FAM86B1E9PN63 330 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 STXBP3O00186 592 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 MEIS1O00470 390 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 DHX15O43143 795 aaKnown RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 HYAL3O43820 417 aaPredicted RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 EDIL3O43854 480 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 CSPG5O95196 566 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 FAM86B2P0C5J1 330 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 GRNP28799 593 aaKnown RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 KIF5BP33176 963 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 MCM5P33992 734 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 MRE11P49959 708 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 ACTR2P61160 394 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 IGBP1P78318 339 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 COASYQ13057 564 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 CBX2Q14781 532 aaPredicted RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 SART3Q15020 963 aaKnown RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 TMEM266Q2M3C6 531 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 PAN2Q504Q3 1202 aaKnown RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 TMCO4Q5TGY1 634 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 MTHFD1LQ6UB35 978 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 PLPPR4Q7Z2D5 763 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 FAM35AQ86V20 835 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 SGMS1Q86VZ5 419 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 SKAP1Q86WV1 359 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 NPAS4Q8IUM7 802 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 CCDC60Q8IWA6 550 aaPredicted RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 KIAA0319LQ8IZA0 1049 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 EFHBQ8N7U6 833 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 FANCBQ8NB91 859 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 PRSS33Q8NF86 280 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 ATP8B4Q8TF62 1192 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 RUFY2Q8WXA3 655 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 SUSD6Q92537 303 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 GLG1Q92896 1179 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 CUL5Q93034 780 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 CDHR1Q96JP9 859 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 TMEM87BQ96K49 555 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 LPIN3Q9BQK8 851 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 MXRA8Q9BRK3 442 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 LZTS2Q9BRK4 669 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 CELF4Q9BZC1 486 aaKnown RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 RNF19AQ9NV58 838 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 TMEM260Q9NX78 707 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 SLC9A2Q9UBY0 812 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 SEC63Q9UGP8 760 aaKnown RBP5.16□□□□□ -1.58
CTNND1-226ENST00000530720 CD207Q9UJ71 328 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 BRPF3Q9ULD4 1205 aa5.16□□□□□ -1.58
CTNND1-226ENST00000530720 BARX2Q9UMQ3 279 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms