RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 OSBPL6Q9BZF3 934 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 PRKD2Q9BZL6 878 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 NT5C3AQ9H0P0 336 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 MARCH5Q9NX47 278 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 USP18Q9UMW8 372 aa11.69□□□□□ -0.54
COPB1-207ENST00000529866 SMG5Q9UPR3 1016 aaKnown RBP11.69□□□□□ -0.54
COPB1-207ENST00000529866 MAP1BP46821 2468 aaKnown RBP11.69□□□□□ -0.54
COPB1-207ENST00000529866 CHD6Q8TD26 2715 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 MSH4O15457 936 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
COPB1-207ENST00000529866 MYBP10242 640 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 FSHRP23945 695 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 CSTF1Q05048 431 aaKnown RBP11.68□□□□□ -0.54
COPB1-207ENST00000529866 UBXN2BQ14CS0 331 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 MLF2Q15773 248 aaPredicted RBP11.68□□□□□ -0.54
COPB1-207ENST00000529866 ST3GAL2Q16842 350 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 RSPO2Q6UXX9 243 aaPredicted RBP11.68□□□□□ -0.54
COPB1-207ENST00000529866 GPR65Q8IYL9 337 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 RNF168Q8IYW5 571 aaPredicted RBP11.68□□□□□ -0.54
COPB1-207ENST00000529866 MAML2Q8IZL2 1156 aaPredicted RBP11.68□□□□□ -0.54
COPB1-207ENST00000529866 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 SLC7A3Q8WY07 619 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 CCDC136Q96JN2 1154 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 EPC1Q9H2F5 836 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 UNC45AQ9H3U1 944 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 ZSCAN32Q9NX65 697 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 GMEB2Q9UKD1 530 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 CDH7Q9ULB5 785 aa11.68□□□□□ -0.54
COPB1-207ENST00000529866 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
COPB1-207ENST00000529866 CACNA1IQ9P0X4 2223 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 NCAM2O15394 837 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 TGM5O43548 720 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 MAFO75444 373 aaPredicted RBP11.67□□□□□ -0.54
COPB1-207ENST00000529866 ITGA4P13612 1032 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 NCLP19338 710 aaKnown RBP11.67□□□□□ -0.54
COPB1-207ENST00000529866 AFF1P51825 1210 aaKnown RBP11.67□□□□□ -0.54
COPB1-207ENST00000529866 GPC5P78333 572 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 SNW1Q13573 536 aaKnown RBP11.67□□□□□ -0.54
COPB1-207ENST00000529866 TAS1R1Q7RTX1 841 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 PALB2Q86YC2 1186 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 COLGALT2Q8IYK4 626 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 SLC5A5Q92911 643 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 TCEANC2Q96MN5 208 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 CEP89Q96ST8 783 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
COPB1-207ENST00000529866 COLEC11Q9BWP8 271 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 ANO2Q9NQ90 1003 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 FNIP2Q9P278 1114 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 BRPF3Q9ULD4 1205 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 COL4A3BPQ9Y5P4 624 aa11.67□□□□□ -0.54
COPB1-207ENST00000529866 TMEM150BA6NC51 233 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 FAM170BA6NMN3 283 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 TBC1D4O60343 1298 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 LRRN2O75325 713 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 ZMYND10O75800 440 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 ERLIN2O94905 339 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 SPATA31D3P0C874 917 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 MLH1P40692 756 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 USP11P51784 963 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 FGD1P98174 961 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 AKAP17AQ02040 695 aaKnown RBP11.66□□□□□ -0.54
COPB1-207ENST00000529866 DSC1Q08554 894 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 NCBP1Q09161 790 aaKnown RBP11.66□□□□□ -0.54
COPB1-207ENST00000529866 USP41Q3LFD5 358 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 ADCK5Q3MIX3 580 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 SLC44A4Q53GD3 710 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 ZBTB41Q5SVQ8 909 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 LIN9Q5TKA1 542 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 PARM1Q6UWI2 310 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 SPATA31D4Q6ZUB0 917 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 DHX32Q7L7V1 743 aaKnown RBP11.66□□□□□ -0.54
COPB1-207ENST00000529866 KSR1Q8IVT5 923 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 HACE1Q8IYU2 909 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 ZBTB44Q8NCP5 570 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 PSPC1Q8WXF1 523 aaKnown RBP11.66□□□□□ -0.54
COPB1-207ENST00000529866 FGF14Q92915 247 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 CCDC51Q96ER9 411 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 SH2D3AQ9BRG2 576 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 FAM126AQ9BYI3 521 aaPredicted RBP11.66□□□□□ -0.54
COPB1-207ENST00000529866 IFT122Q9HBG6 1241 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 LTB4R2Q9NPC1 389 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 CHST7Q9NS84 486 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 RAB23Q9ULC3 237 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 PPME1Q9Y570 386 aa11.66□□□□□ -0.54
COPB1-207ENST00000529866 ATRXP46100 2492 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 USP24Q9UPU5 2620 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 ARL5CA6NH57 179 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
COPB1-207ENST00000529866 XYLBO75191 536 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 PSMD10O75832 226 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 ADRB1P08588 477 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 HNRNPA1P09651 372 aaKnown RBP eCLIP11.65□□□□□ -0.54
COPB1-207ENST00000529866 CDC27P30260 824 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 PSMC5P62195 406 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 PCBP1Q15365 356 aaKnown RBP eCLIP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms