RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 SMAD3P84022 425 aaKnown RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 GTF2BQ00403 316 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 NCBP1Q09161 790 aaKnown RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 TMEM132AQ24JP5 1023 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 TWF2Q6IBS0 349 aaKnown RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 TMCO2Q7Z6W1 182 aaPredicted RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 ELOA2Q8IYF1 753 aaPredicted RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 KCNN1Q92952 543 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 TARS2Q9BW92 718 aaKnown RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 STRA6Q9BX79 667 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 MTIF3Q9H2K0 278 aaKnown RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 SLC39A2Q9NP94 309 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 HOOK1Q9UJC3 728 aaKnown RBP15.39■□□□□ 0.05
USF1-209ENST00000529476 SLC4A7Q9Y6M7 1214 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 TTC3P53804 2025 aa15.39■□□□□ 0.05
USF1-209ENST00000529476 A0A1B0GUA9 196 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 C9IYK1 514 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 AMHP03971 560 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 SCP2P22307 547 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 KCNA1Q09470 495 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 CAMK4Q16566 473 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 UBXN11Q5T124 520 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 ATF7IP2Q5U623 682 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 EEF1DP3Q658K8 133 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 NOTUMQ6P988 496 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 FAM43BQ6ZT52 329 aaPredicted RBP15.38■□□□□ 0.05
USF1-209ENST00000529476 SLC24A5Q71RS6 500 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 MYOCDQ8IZQ8 938 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 FAM122AQ96E09 287 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 ACO2Q99798 780 aaKnown RBP15.38■□□□□ 0.05
USF1-209ENST00000529476 EIF2AQ9BY44 585 aaKnown RBP15.38■□□□□ 0.05
USF1-209ENST00000529476 MRPL4Q9BYD3 311 aaKnown RBP15.38■□□□□ 0.05
USF1-209ENST00000529476 PDZD7Q9H5P4 517 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 C1orf112Q9NSG2 853 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 PCDHA5Q9Y5H7 936 aa15.38■□□□□ 0.05
USF1-209ENST00000529476 TMEM265A0A087WTH1 108 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 PRPF6O94906 941 aaKnown RBP15.37■□□□□ 0.05
USF1-209ENST00000529476 RHOBTB3O94955 611 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 SARSP49591 514 aaKnown RBP15.37■□□□□ 0.05
USF1-209ENST00000529476 STK4Q13043 487 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 ALCAMQ13740 583 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 KCNB1Q14721 858 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 L1TD1Q5T7N2 865 aaKnown RBP15.37■□□□□ 0.05
USF1-209ENST00000529476 EPM2AIP1Q7L775 607 aaPredicted RBP15.37■□□□□ 0.05
USF1-209ENST00000529476 MAP4K3Q8IVH8 894 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 KIAA0895Q8NCT3 520 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 SMARCE1Q969G3 411 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 CCDC47Q96A33 483 aaKnown RBP15.37■□□□□ 0.05
USF1-209ENST00000529476 HVCN1Q96D96 273 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 CCDC51Q96ER9 411 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 BICD1Q96G01 975 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 IKZF4Q9H2S9 585 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 CLSTN2Q9H4D0 955 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 FAM105AQ9NUU6 356 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 GBF1Q92538 1859 aa15.37■□□□□ 0.05
USF1-209ENST00000529476 A0A0U1RQF3 1178 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 N4BP3O15049 544 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 UPP2O95045 317 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 SMC2O95347 1197 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 NPTXRO95502 500 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 ATP2A2P16615 1042 aaKnown RBP15.36■□□□□ 0.05
USF1-209ENST00000529476 ABCD1P33897 745 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 FAM189BP81408 668 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 PSMD2Q13200 908 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 FAM117BQ6P1L5 589 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 SLC27A1Q6PCB7 646 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 ZPBP2Q6X784 338 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 STXBP4Q6ZWJ1 553 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 ECHDC2Q86YB7 292 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 SPATA20Q8TB22 786 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 ZBTB45Q96K62 511 aaPredicted RBP15.36■□□□□ 0.05
USF1-209ENST00000529476 GSDMAQ96QA5 445 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 ACCSQ96QU6 501 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 SLC9A7Q96T83 725 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 TRAIPQ9BWF2 469 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 PTPRHQ9HD43 1115 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 TNFSF13BQ9Y275 285 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 GDAQ9Y2T3 454 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 PCDHB2Q9Y5E7 798 aa15.36■□□□□ 0.05
USF1-209ENST00000529476 GRXCR1A8MXD5 290 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 TISP43B9A030 160 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 ANKRD63C9JTQ0 380 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 ABLIM1O14639 778 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 HNRNPDLO14979 420 aaKnown RBP15.35■□□□□ 0.05
USF1-209ENST00000529476 EIF3DO15371 548 aaKnown RBP eCLIP15.35■□□□□ 0.05
USF1-209ENST00000529476 MBD3O95983 291 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 PIGRP01833 764 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 ATF7P17544 494 aaPredicted RBP15.35■□□□□ 0.05
USF1-209ENST00000529476 HOXD13P35453 343 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 LIG4P49917 911 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 RAB27AP51159 221 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 GRIN2CQ14957 1233 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 SLC39A4Q6P5W5 647 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 ZBTB33Q86T24 672 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 NPAS4Q8IUM7 802 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 NELFCDQ8IXH7 590 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 CRIPAKQ8N1N5 446 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 RNF169Q8NCN4 708 aa15.35■□□□□ 0.05
USF1-209ENST00000529476 SMG8Q8ND04 991 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms