RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 LRRC41Q15345 812 aa6.24□□□□□ -1.41
CTR9-204ENST00000529355 SURF1Q15526 300 aa6.24□□□□□ -1.41
CTR9-204ENST00000529355 SNX33Q8WV41 574 aa6.24□□□□□ -1.41
CTR9-204ENST00000529355 FATE1Q969F0 183 aa6.24□□□□□ -1.41
CTR9-204ENST00000529355 RAB24Q969Q5 203 aa6.24□□□□□ -1.41
CTR9-204ENST00000529355 ENKD1Q9H0I2 346 aa6.24□□□□□ -1.41
CTR9-204ENST00000529355 AASDHPPTQ9NRN7 309 aa6.24□□□□□ -1.41
CTR9-204ENST00000529355 ZFR2Q9UPR6 939 aaKnown RBP6.24□□□□□ -1.41
CTR9-204ENST00000529355 A0A1W2PRX2 142 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 CCND1P24385 295 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 EDNRBP24530 442 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 PLP2Q04941 152 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 MALLQ13021 153 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 GLB1LQ6UWU2 654 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 ZBTB46Q86UZ6 589 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 GPR156Q8NFN8 814 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 Q8TCH9 128 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 STON2Q8WXE9 905 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 RELTQ969Z4 430 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 RTFDC1Q9BY42 306 aaPredicted RBP6.23□□□□□ -1.41
CTR9-204ENST00000529355 SLC13A1Q9BZW2 595 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 LDAHQ9H6V9 325 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 GREM2Q9H772 168 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 IL23AQ9NPF7 189 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 PLA2G3Q9NZ20 509 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 IP6K2Q9UHH9 426 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 LIMCH1Q9UPQ0 1083 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 SIK3Q9Y2K2 1263 aa6.23□□□□□ -1.41
CTR9-204ENST00000529355 JUNP05412 331 aaKnown RBP6.22□□□□□ -1.41
CTR9-204ENST00000529355 MSX2P35548 267 aaPredicted RBP6.22□□□□□ -1.41
CTR9-204ENST00000529355 SLC6A9P48067 706 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 GRM7Q14831 915 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 MUM1L1Q5H9M0 696 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 ODR4Q5SWX8 454 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 Q6ZSN1 163 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 CIR1Q86X95 450 aaPredicted RBP6.22□□□□□ -1.41
CTR9-204ENST00000529355 CMTM4Q8IZR5 234 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 OR5M3Q8NGP4 307 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 CXorf38Q8TB03 319 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 MDM1Q8TC05 714 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 HOXB13Q92826 284 aaPredicted RBP6.22□□□□□ -1.41
CTR9-204ENST00000529355 LPPQ93052 612 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 CHMP4CQ96CF2 233 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 INTUQ9ULD6 942 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 LUC7L2Q9Y383 392 aaKnown RBP6.22□□□□□ -1.41
CTR9-204ENST00000529355 SH3BP1Q9Y3L3 701 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 RPTORQ8N122 1335 aa6.22□□□□□ -1.41
CTR9-204ENST00000529355 PATE3B3GLJ2 98 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 AKAP10O43572 662 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 ITGA10O75578 1167 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 SLC5A3P53794 718 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 PTTG1IPP53801 180 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 KIF23Q02241 960 aaPredicted RBP6.21□□□□□ -1.42
CTR9-204ENST00000529355 IL10RAQ13651 578 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 C3orf36Q3SXR2 165 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 EFCAB2Q5VUJ9 269 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 SPTY2D1Q68D10 685 aaPredicted RBP6.21□□□□□ -1.42
CTR9-204ENST00000529355 CMTR2Q8IYT2 770 aaKnown RBP6.21□□□□□ -1.42
CTR9-204ENST00000529355 DNERQ8NFT8 737 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 CEP95Q96GE4 821 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 CD248Q9HCU0 757 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 GPRC5DQ9NZD1 345 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 TRPS1Q9UHF7 1281 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 RCAN3Q9UKA8 241 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 PCDHA13Q9Y5I0 950 aa6.21□□□□□ -1.42
CTR9-204ENST00000529355 CSRP2Q16527 193 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 MST1LQ2TV78 715 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 ANO4Q32M45 955 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 GAGE13Q4V321 117 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 C19orf54Q5BKX5 351 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 MFSD14BQ5SR56 506 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 ANKS6Q68DC2 871 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 ZNF585AQ6P3V2 769 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 FAM111BQ6SJ93 734 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 XYLT1Q86Y38 959 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 THEMISQ8N1K5 641 aaPredicted RBP6.2□□□□□ -1.42
CTR9-204ENST00000529355 CPA6Q8N4T0 437 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 COA7Q96BR5 231 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 LOXL4Q96JB6 756 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 CEP89Q96ST8 783 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 ADI1Q9BV57 179 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 RBM12Q9NTZ6 932 aaKnown RBP6.2□□□□□ -1.42
CTR9-204ENST00000529355 KLHL42Q9P2K6 505 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 IPPQ9Y573 584 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 MRFAP1Q9Y605 127 aa6.2□□□□□ -1.42
CTR9-204ENST00000529355 CCDC154A6NI56 674 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 MTSS1O43312 755 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 HTRA2O43464 458 aaPredicted RBP6.19□□□□□ -1.42
CTR9-204ENST00000529355 RAD17O75943 681 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 ABLIM3O94929 683 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 SNUPNO95149 360 aaKnown RBP6.19□□□□□ -1.42
CTR9-204ENST00000529355 FPR1P21462 350 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 SREBF1P36956 1147 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 RECQLP46063 649 aaPredicted RBP6.19□□□□□ -1.42
CTR9-204ENST00000529355 DUSP2Q05923 314 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 PRAMEF14Q5SWL7 426 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 ELOA2Q8IYF1 753 aaPredicted RBP6.19□□□□□ -1.42
CTR9-204ENST00000529355 JDP2Q8WYK2 163 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 KAT5Q92993 513 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms