RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 CDSNQ15517 529 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 UAP1L1Q3KQV9 507 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 ZBTB41Q5SVQ8 909 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 USP45Q70EL2 814 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 GPR155Q7Z3F1 870 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 SRGAP1Q7Z6B7 1085 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 CATIPQ7Z7H3 387 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 KBTBD2Q8IY47 623 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 GRAMD1CQ8IYS0 662 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 PRR18Q8N4B5 295 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 RPGRQ92834 1020 aaKnown RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 DVL3Q92997 716 aaPredicted RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 YTHDC1Q96MU7 727 aaKnown RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 MAP3K14Q99558 947 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 ACO2Q99798 780 aaKnown RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 ACE2Q9BYF1 805 aaPredicted RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 GTPBP4Q9BZE4 634 aaKnown RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 PCDH18Q9HCL0 1135 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 SLC39A2Q9NP94 309 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 NGRNQ9NPE2 291 aaKnown RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 GALNT8Q9NY28 637 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 USP18Q9UMW8 372 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 FAM50BQ9Y247 325 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 PPFIA4O75335 1185 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 PCDH8O95206 1070 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 PFKMP08237 780 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 SLC5A1P13866 664 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 GSPT1P15170 499 aaKnown RBP4.1□□□□□ -1.75
BRCA2-203ENST00000528762 XPAP23025 273 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-203ENST00000528762 ECE1P42892 770 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 GLRBP48167 497 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 RGS3P49796 1198 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 FXR1P51114 621 aaKnown RBP eCLIP4.1□□□□□ -1.75
BRCA2-203ENST00000528762 NEK3P51956 506 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 PFKPQ01813 784 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 SPIDRQ14159 915 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 TRIM25Q14258 630 aaKnown RBP4.1□□□□□ -1.75
BRCA2-203ENST00000528762 LLGL1Q15334 1064 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 MBNL2Q5VZF2 373 aaKnown RBP4.1□□□□□ -1.75
BRCA2-203ENST00000528762 CD276Q5ZPR3 534 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 ERAP2Q6P179 960 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 TMED8Q6PL24 325 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-203ENST00000528762 LYSMD2Q8IV50 215 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 ZFPM1Q8IX07 1006 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 Q8N1X5 172 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 CAMKK1Q8N5S9 505 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 NUDT10Q8NFP7 164 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 OR14C36Q8NHC7 312 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 DIS3LQ8TF46 1054 aaKnown RBP4.1□□□□□ -1.75
BRCA2-203ENST00000528762 GAB3Q8WWW8 586 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 MVB12AQ96EY5 273 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 NUDT11Q96G61 164 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 FAM193BQ96PV7 902 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-203ENST00000528762 AMNQ9BXJ7 453 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 PRDM12Q9H4Q4 367 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 FAM204AQ9H8W3 233 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 INCENPQ9NQS7 918 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 FTSJ1Q9UET6 329 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 SERPINB13Q9UIV8 391 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 DENND2AQ9ULE3 1009 aa4.1□□□□□ -1.75
BRCA2-203ENST00000528762 KLRG2A4D1S0 409 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-203ENST00000528762 TUSC2O75896 110 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 MPIG6BO95866 241 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 HRGP04196 525 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 MYBP10242 640 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 RHCEP18577 417 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 APEX1P27695 318 aaKnown RBP4.09□□□□□ -1.75
BRCA2-203ENST00000528762 MC4RP32245 332 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 GPR15P49685 360 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 CCT2P78371 535 aaKnown RBP4.09□□□□□ -1.75
BRCA2-203ENST00000528762 RHDQ02161 417 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 PGS1Q32NB8 556 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 C10orf62Q5T681 223 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-203ENST00000528762 TOGARAM2Q6ZUX3 1019 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 OVCH2Q7RTZ1 564 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 PROSER1Q86XN7 944 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 SLC41A1Q8IVJ1 513 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 TTC9BQ8N6N2 239 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 TSPEARQ8WU66 669 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 NRG4Q8WWG1 115 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 TNIP3Q96KP6 325 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 GNRHR2Q96P88 292 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 ELAC2Q9BQ52 826 aaKnown RBP4.09□□□□□ -1.75
BRCA2-203ENST00000528762 BTBD2Q9BX70 525 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 KLC2Q9H0B6 622 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 DEF6Q9H4E7 631 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 SYNPO2Q9UMS6 1093 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 LIMCH1Q9UPQ0 1083 aa4.09□□□□□ -1.75
BRCA2-203ENST00000528762 A0A0A6YYJ9 748 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 C9orf118A6NHY6 69 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 CCDC154A6NI56 674 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 ZNF839A8K0R7 811 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 PMM2O15305 246 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 HTRA2O43464 458 aaPredicted RBP4.08□□□□□ -1.76
BRCA2-203ENST00000528762 DTNBO60941 627 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 ZBED1O96006 694 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 AMHP03971 560 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 TM4SF4P48230 202 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 PPP2CBP62714 309 aa4.08□□□□□ -1.76
BRCA2-203ENST00000528762 PPP2CAP67775 309 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms