RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 KLHL5Q96PQ7 755 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 CACNG4Q9UBN1 327 aa12.86□□□□□ -0.35
SRPRA-203ENST00000528744 INO80B-WBP1J3KQ70 363 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 PDGFBP01127 241 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-203ENST00000528744 CNPP09543 421 aaKnown RBP12.85□□□□□ -0.35
SRPRA-203ENST00000528744 MYBP10242 640 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 HOXB8P17481 243 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-203ENST00000528744 AKAP5P24588 427 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-203ENST00000528744 CA8P35219 290 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 RNASELQ05823 741 aaKnown RBP12.85□□□□□ -0.35
SRPRA-203ENST00000528744 POU5F1BQ06416 359 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 NBR1Q14596 966 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 BMP8AQ7Z5Y6 402 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 ALYREFQ86V81 257 aaKnown RBP12.85□□□□□ -0.35
SRPRA-203ENST00000528744 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 CSRNP2Q9H175 543 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 NXF3Q9H4D5 531 aaKnown RBP12.85□□□□□ -0.35
SRPRA-203ENST00000528744 FAN1Q9Y2M0 1017 aa12.85□□□□□ -0.35
SRPRA-203ENST00000528744 PRG3Q9Y2Y8 225 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-203ENST00000528744 ARL5CA6NH57 179 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 INPPL1O15357 1258 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
SRPRA-203ENST00000528744 DGAT1O75907 488 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 ITGA4P13612 1032 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 MLH1P40692 756 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 TOB1P50616 345 aaPredicted RBP12.84□□□□□ -0.35
SRPRA-203ENST00000528744 SCNN1GP51170 649 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 DSC1Q08554 894 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 MXD4Q14582 209 aaPredicted RBP12.84□□□□□ -0.35
SRPRA-203ENST00000528744 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 EXOC8Q8IYI6 725 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 RNF168Q8IYW5 571 aaPredicted RBP12.84□□□□□ -0.35
SRPRA-203ENST00000528744 PRSS33Q8NF86 280 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 PBXIP1Q96AQ6 731 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 B3GALT6Q96L58 329 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 APOL6Q9BWW8 343 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 POLR3FQ9H1D9 316 aaPredicted RBP12.84□□□□□ -0.35
SRPRA-203ENST00000528744 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 LIMCH1Q9UPQ0 1083 aa12.84□□□□□ -0.35
SRPRA-203ENST00000528744 ZNF318Q5VUA4 2279 aa12.83□□□□□ -0.35
SRPRA-203ENST00000528744 A0A1B0GUA9 196 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 GAS2O43903 313 aaKnown RBP12.83□□□□□ -0.36
SRPRA-203ENST00000528744 ASGR2P07307 311 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 XRCC6P12956 609 aaKnown RBP eCLIP12.83□□□□□ -0.36
SRPRA-203ENST00000528744 VCPP55072 806 aaKnown RBP12.83□□□□□ -0.36
SRPRA-203ENST00000528744 NHLH1Q02575 133 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 IL17AQ16552 155 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 PAAF1Q9BRP4 392 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 TMEM175Q9BSA9 504 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 GPR62Q9BZJ7 368 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 KANSL3Q9P2N6 904 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 LIMD1Q9UGP4 676 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 ZDBF2Q9HCK1 2354 aa12.83□□□□□ -0.36
SRPRA-203ENST00000528744 C2CD2LO14523 706 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 ERLIN2O94905 339 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 NPTXRO95502 500 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 BRD1O95696 1058 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 AXLP30530 894 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 OR1G1P47890 313 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 CLCN4P51793 760 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 ITIH3Q06033 890 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 PTPN21Q16825 1174 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 TPRNQ4KMQ1 711 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 NOTUMQ6P988 496 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 KREMEN2Q8NCW0 462 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 URGCPQ8TCY9 931 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 C8orf76Q96K31 380 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 POLR3CQ9BUI4 534 aaPredicted RBP12.82□□□□□ -0.36
SRPRA-203ENST00000528744 NFKBIZQ9BYH8 718 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 FZD8Q9H461 694 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 CNTNAP2Q9UHC6 1331 aa12.82□□□□□ -0.36
SRPRA-203ENST00000528744 FSD2A1L4K1 749 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 TEX28O15482 410 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 N4BP1O75113 896 aaKnown RBP12.81□□□□□ -0.36
SRPRA-203ENST00000528744 SOD2P04179 222 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 SPATA31D3P0C874 917 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 KLRC2P26717 231 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 SIGLEC14Q08ET2 396 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 TCF15Q12870 199 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 TRIM29Q14134 588 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 TFDP1Q14186 410 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 EEF1DP3Q658K8 133 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 PADI6Q6TGC4 694 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 SPATA31D4Q6ZUB0 917 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 GPR149Q86SP6 731 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 CNNM3Q8NE01 707 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 RSPH1Q8WYR4 309 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 MFSD14AQ96MC6 490 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 FAM193BQ96PV7 902 aaPredicted RBP12.81□□□□□ -0.36
SRPRA-203ENST00000528744 RPS6KC1Q96S38 1066 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 KIFC3Q9BVG8 833 aa12.81□□□□□ -0.36
SRPRA-203ENST00000528744 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
SRPRA-203ENST00000528744 RXFP1Q9HBX9 757 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms