RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 GLRA2P23416 452 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 MTHFRP42898 656 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 MRE11P49959 708 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 VCPP55072 806 aaKnown RBP17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 MBTD1Q05BQ5 628 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 CAPSQ13938 189 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 MXD4Q14582 209 aaPredicted RBP17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 AMHR2Q16671 573 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 ATAT1Q5SQI0 421 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 MAEAQ7L5Y9 396 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 ZFP42Q96MM3 310 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 NECTIN4Q96NY8 510 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 MARCH5Q9NX47 278 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 KANSL3Q9P2N6 904 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 LIMD1Q9UGP4 676 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 NR2E1Q9Y466 385 aa17.28■□□□□ 0.36
CLNS1A-210ENST00000528364 CNTNAP2Q9UHC6 1331 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 ARID2Q68CP9 1835 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 ARL5CA6NH57 179 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 POTEMA6NI47 508 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 C2CD2LO14523 706 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 NEMFO60524 1076 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 ASGR2P07307 311 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 SPATA31C1P0DKV0 1188 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 ARF4P18085 180 aaPredicted RBP17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 KLRC2P26717 231 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 RARRES1P49788 294 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 GIT2Q14161 759 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 CABP7Q86V35 215 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 IFNLR1Q8IU57 520 aaPredicted RBP17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 SUGP1Q8IWZ8 645 aaKnown RBP17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 COLGALT2Q8IYK4 626 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 RIPOR3Q96MK2 946 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 TMEM175Q9BSA9 504 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 CSRNP2Q9H175 543 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 POLR3FQ9H1D9 316 aaPredicted RBP17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 GPRC5CQ9NQ84 441 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 DZANK1Q9NVP4 752 aa17.27■□□□□ 0.36
CLNS1A-210ENST00000528364 DGAT1O75907 488 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 BRD1O95696 1058 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 AKAP5P24588 427 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 AXLP30530 894 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 MCM7P33993 719 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 MLH1P40692 756 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 OR1G1P47890 313 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 SCNN1GP51170 649 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 TFDP1Q14186 410 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 KIAA1841Q6NSI8 718 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 NOTUMQ6P988 496 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 CNNM3Q8NE01 707 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 RABGGTAQ92696 567 aa17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 DBR1Q9UK59 544 aaKnown RBP17.26■□□□□ 0.35
CLNS1A-210ENST00000528364 CARNS1A5YM72 827 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 USO1O60763 962 aaKnown RBP17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 MED24O75448 989 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 AVPR2P30518 371 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 CLCN4P51793 760 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 POU5F1BQ06416 359 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 TCF15Q12870 199 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 TRIM29Q14134 588 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 ZNF174Q15697 407 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 CATSPER3Q86XQ3 398 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 GSTCDQ8NEC7 633 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 B3GALT6Q96L58 329 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 EMILIN2Q9BXX0 1053 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 NXF3Q9H4D5 531 aaKnown RBP17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 UBN1Q9NPG3 1134 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 MRPL17Q9NRX2 175 aaKnown RBP17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 KLK14Q9P0G3 267 aa17.25■□□□□ 0.35
CLNS1A-210ENST00000528364 CACNA1HO95180 2353 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 TTLL13PA6NNM8 815 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 INPPL1O15357 1258 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 NPTXRO95502 500 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 SOD2P04179 222 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 DSC1Q08554 894 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 NCBP1Q09161 790 aaKnown RBP17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 KIAA0319Q5VV43 1072 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 GPR149Q86SP6 731 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 CCDC83Q8IWF9 413 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 CCDC43Q96MW1 224 aaKnown RBP17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 CACNG4Q9UBN1 327 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 SORCS3Q9UPU3 1222 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 USP20Q9Y2K6 914 aa17.24■□□□□ 0.35
CLNS1A-210ENST00000528364 SPDYE4A6NLX3 237 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 TEX28O15482 410 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 EFEMP2O95967 443 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 SPATA31D3P0C874 917 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 XRCC6P12956 609 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 PCBP1Q15365 356 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 SPATA31D4Q6ZUB0 917 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 ZDHHC14Q8IZN3 488 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 TDRD5Q8NAT2 981 aaKnown RBP17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 CCDC51Q96ER9 411 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 RPS6KC1Q96S38 1066 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 HERC2P3Q9BVR0 1158 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 PARP2Q9UGN5 583 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 GIT1Q9Y2X7 761 aa17.23■□□□□ 0.35
CLNS1A-210ENST00000528364 WDFY4Q6ZS81 3184 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms