RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 TMEM175Q9BSA9 504 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 CCDC113Q9H0I3 377 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 TMEM134Q9H6X4 195 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 CLDND1Q9NY35 253 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 STK39Q9UEW8 545 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 INPP5FQ9Y2H2 1132 aa13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 MORC2Q9Y6X9 1032 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-209ENST00000528230 K7ERI5 159 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 HIP1RO75146 1068 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 ALDH2P05091 517 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 PRKCBP05771 671 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 LTBRP36941 435 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 SLC12A3P55017 1021 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 BMS1Q14692 1282 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 ZRSR1Q15695 479 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 ADGRD2Q7Z7M1 963 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 DAW1Q8N136 415 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 EFHBQ8N7U6 833 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 TMEM169Q96HH4 297 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 FAM193BQ96PV7 902 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 RUSC1Q9BVN2 902 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 CCSER1Q9C0I3 900 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 TLE6Q9H808 572 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 POLD4Q9HCU8 107 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 CLIC4Q9Y696 253 aa13.36□□□□□ -0.27
TRAPPC4-209ENST00000528230 MYH15Q9Y2K3 1946 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 ARL5CA6NH57 179 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 NT5C1B-RDH14C9J2C7 533 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 DDHD2O94830 711 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 NPTXRO95502 500 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 PLA2G4BP0C869 781 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 PBX3P40426 434 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 NPTX2P47972 431 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 AFF1P51825 1210 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 PEX3P56589 373 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 MAPK7Q13164 816 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 DMP1Q13316 513 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 DDX53Q86TM3 631 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 SPIRE2Q8WWL2 714 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 IGSF21Q96ID5 467 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 UHRF1Q96T88 793 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 GAD1Q99259 594 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 PLIN2Q99541 437 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 ADPGKQ9BRR6 497 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 PDZD7Q9H5P4 517 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 IGFLR1Q9H665 355 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 FAM50BQ9Y247 325 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 HES2Q9Y543 173 aa13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-209ENST00000528230 GRXCR2A6NFK2 248 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 CCDC169A6NNP5 214 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 POMCP01189 267 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 NRIP1P48552 1158 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 SLC11A1P49279 550 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 GRIN1Q05586 938 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 GIT2Q14161 759 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 DUSP6Q16828 381 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 TMEM132AQ24JP5 1023 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 PTCRAQ6ISU1 281 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 EP400NLQ6ZTU2 488 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 TMC7Q7Z402 723 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 CDR2LQ86X02 465 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 COLGALT2Q8IYK4 626 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 MRPL43Q8N983 215 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 GSTCDQ8NEC7 633 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 TCF25Q9BQ70 676 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 GBP3Q9H0R5 595 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 NXF3Q9H4D5 531 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 KMT5AQ9NQR1 393 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 ENTPD7Q9NQZ7 604 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 MIOSQ9NXC5 875 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 ARHGAP28Q9P2N2 729 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 DNAJB4Q9UDY4 337 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 TNFSF13BQ9Y275 285 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 FAN1Q9Y2M0 1017 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 IRAK3Q9Y616 596 aa13.34□□□□□ -0.27
TRAPPC4-209ENST00000528230 TRIP11Q15643 1979 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 TNFRSF10AO00220 468 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 NRP1O14786 923 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 CSPG5O95196 566 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 PLS3P13797 630 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 SCP2P22307 547 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 AKAP5P24588 427 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 MLH1P40692 756 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 SMTNP53814 917 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 DSC1Q08554 894 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 SLC39A14Q15043 492 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms