RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 DDX25Q9UHL0 483 aaKnown RBP11.1□□□□□ -0.63
CAPN1-210ENST00000527699 A0A087WWV3 80 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 CYSRT1A8MQ03 144 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 ZBTB39O15060 712 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 CFHP08603 1231 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 SPATA31D3P0C874 917 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 MTHFRP42898 656 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 USP11P51784 963 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 ITIH3Q06033 890 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 SPEM2Q0P670 501 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 BMS1Q14692 1282 aaKnown RBP11.09□□□□□ -0.63
CAPN1-210ENST00000527699 Q4G0T1 1027 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 ATAT1Q5SQI0 421 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 NCAPH2Q6IBW4 605 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 GLB1LQ6UWU2 654 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 AGMOQ6ZNB7 445 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 PRR23BQ6ZRT6 265 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 SPATA31D4Q6ZUB0 917 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 ANO5Q75V66 913 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 DDX53Q86TM3 631 aaKnown RBP11.09□□□□□ -0.63
CAPN1-210ENST00000527699 GLYCTKQ8IVS8 523 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 SLC22A17Q8WUG5 538 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 RABGGTAQ92696 567 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 CPB2Q96IY4 423 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 CEP170P1Q96L14 293 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 MINDY3Q9H8M7 445 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 PARD6AQ9NPB6 346 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 CA14Q9ULX7 337 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 PRG3Q9Y2Y8 225 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-210ENST00000527699 PCDHB2Q9Y5E7 798 aa11.09□□□□□ -0.63
CAPN1-210ENST00000527699 EIF4E1BA6NMX2 242 aaKnown RBP11.08□□□□□ -0.64
CAPN1-210ENST00000527699 F8W810 466 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 TAF4O00268 1085 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 CPLX1O14810 134 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 MARCH6O60337 910 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 MAFO75444 373 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-210ENST00000527699 CTSAP10619 480 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 PSMA5P28066 241 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 PSMC5P62195 406 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 TDGQ13569 410 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 CTTNQ14247 550 aaKnown RBP11.08□□□□□ -0.64
CAPN1-210ENST00000527699 NONOQ15233 471 aaKnown RBP eCLIP11.08□□□□□ -0.64
CAPN1-210ENST00000527699 PTPN14Q15678 1187 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 IL31Q6EBC2 164 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 LURAP1LQ8IV03 231 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 TEX2Q8IWB9 1127 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 TRIM22Q8IYM9 498 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 URGCPQ8TCY9 931 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 PRPF31Q8WWY3 499 aaKnown RBP11.08□□□□□ -0.64
CAPN1-210ENST00000527699 RSAD2Q8WXG1 361 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 DDX1Q92499 740 aaKnown RBP11.08□□□□□ -0.64
CAPN1-210ENST00000527699 KIF12Q96FN5 646 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 KLHL5Q96PQ7 755 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 FAM193BQ96PV7 902 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-210ENST00000527699 TBC1D17Q9HA65 648 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 CYP26B1Q9NR63 512 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 CHST12Q9NRB3 414 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 RGL1Q9NZL6 768 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 DUSP12Q9UNI6 340 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 HES2Q9Y543 173 aa11.08□□□□□ -0.64
CAPN1-210ENST00000527699 HELZ2Q9BYK8 2649 aaKnown RBP11.08□□□□□ -0.64
CAPN1-210ENST00000527699 NID2Q14112 1375 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 IGKV6-21A0A0C4DH24 114 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 FAM205CA6NFA0 338 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 SRRM3A6NNA2 597 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-210ENST00000527699 NRP1O14786 923 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 NARSO43776 548 aaKnown RBP11.07□□□□□ -0.64
CAPN1-210ENST00000527699 CNPP09543 421 aaKnown RBP11.07□□□□□ -0.64
CAPN1-210ENST00000527699 OR1G1P47890 313 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 POLGP54098 1239 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-210ENST00000527699 AK2P54819 239 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 CYP4A11Q02928 519 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 NPY5RQ15761 445 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 UBXN11Q5T124 520 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 KIAA1841Q6NSI8 718 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 RUFY3Q7L099 469 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 CDR2LQ86X02 465 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-210ENST00000527699 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 PGBD4Q96DM1 585 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 DYDC2Q96IM9 177 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 B3GALT6Q96L58 329 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 EIF2AQ9BY44 585 aaKnown RBP11.07□□□□□ -0.64
CAPN1-210ENST00000527699 INO80BQ9C086 356 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-210ENST00000527699 RNF39Q9H2S5 420 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 IFT122Q9HBG6 1241 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 SH3GLB2Q9NR46 395 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 CACNG4Q9UBN1 327 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 FAN1Q9Y2M0 1017 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 SIT1Q9Y3P8 196 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 COL4A3BPQ9Y5P4 624 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 WDR81Q562E7 1941 aa11.07□□□□□ -0.64
CAPN1-210ENST00000527699 CYP3A7-CYP3A51PA0A087WV96 503 aa11.06□□□□□ -0.64
CAPN1-210ENST00000527699 CCDC194A0A1B0GVG4 234 aa11.06□□□□□ -0.64
CAPN1-210ENST00000527699 POTEMA6NI47 508 aa11.06□□□□□ -0.64
CAPN1-210ENST00000527699 M0R2N6 131 aa11.06□□□□□ -0.64
CAPN1-210ENST00000527699 CCNT1O60563 726 aaKnown RBP11.06□□□□□ -0.64
CAPN1-210ENST00000527699 DEXIO95424 95 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms