RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TRAF3IP3Q9Y228 551 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 PPP2R2CQ9Y2T4 447 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 A0A087WZ62 844 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 KIF2AO00139 706 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-203ENST00000527275 PDXKO00764 312 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 GPC3P51654 580 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 EDRF1Q3B7T1 1238 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 CDCA2Q69YH5 1023 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-203ENST00000527275 TOGARAM2Q6ZUX3 1019 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 MAP4K3Q8IVH8 894 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 FDXACB1Q9BRP7 624 aaPredicted RBP20.51■□□□□ 0.87
SMPD1-203ENST00000527275 PRDM10Q9NQV6 1147 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 TYW1Q9NV66 732 aaKnown RBP20.51■□□□□ 0.87
SMPD1-203ENST00000527275 CAPN11Q9UMQ6 739 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 GINS2Q9Y248 185 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 LUC7L2Q9Y383 392 aaKnown RBP20.51■□□□□ 0.87
SMPD1-203ENST00000527275 SOWAHDA6NJG2 315 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 TISP43B9A030 160 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 GNA14O95837 355 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 TFRCP02786 760 aaKnown RBP20.51■□□□□ 0.87
SMPD1-203ENST00000527275 FECHP22830 423 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 PTENP60484 403 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 ADAM9Q13443 819 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 PTGISQ16647 500 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 KIZQ2M2Z5 673 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 TAF2Q6P1X5 1199 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 REXO1L1PQ8IX06 675 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 ZNF592Q92610 1267 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 KCNN1Q92952 543 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 HVCN1Q96D96 273 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 MINDY3Q9H8M7 445 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 TRMT13Q9NUP7 481 aaKnown RBP20.51■□□□□ 0.87
SMPD1-203ENST00000527275 USP20Q9Y2K6 914 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 PAXBP1Q9Y5B6 917 aa20.51■□□□□ 0.87
SMPD1-203ENST00000527275 CSDE1O75534 798 aaKnown RBP20.5■□□□□ 0.87
SMPD1-203ENST00000527275 EFNA5P52803 228 aa20.5■□□□□ 0.87
SMPD1-203ENST00000527275 MTF1Q14872 753 aa20.5■□□□□ 0.87
SMPD1-203ENST00000527275 SERINC5Q86VE9 423 aa20.5■□□□□ 0.87
SMPD1-203ENST00000527275 ZC3H3Q8IXZ2 948 aaKnown RBP20.5■□□□□ 0.87
SMPD1-203ENST00000527275 NLRP7Q8WX94 980 aa20.5■□□□□ 0.87
SMPD1-203ENST00000527275 PCMTD1Q96MG8 357 aaPredicted RBP20.5■□□□□ 0.87
SMPD1-203ENST00000527275 SCLT1Q96NL6 688 aa20.5■□□□□ 0.87
SMPD1-203ENST00000527275 KLK7P49862 253 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 POU5F1BQ06416 359 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 STRN3Q13033 797 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 RAD9BQ6WBX8 426 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 HS2ST1Q7LGA3 356 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 TMTC1Q8IUR5 882 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 ZBTB8OSQ8IWT0 167 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 OR8K1Q8NGG5 319 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 WNT8BQ93098 351 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 NFKBIZQ9BYH8 718 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 TMEM134Q9H6X4 195 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 INO80B-WBP1J3KQ70 363 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 CETN3O15182 167 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 CLIC2O15247 247 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 GPR32O75388 356 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 IQCF3P0C7M6 154 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 TRIM21P19474 475 aaKnown RBP20.49■□□□□ 0.87
SMPD1-203ENST00000527275 SCP2P22307 547 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 ABCD1P33897 745 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 PHKA2P46019 1235 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 SLC43A3Q8NBI5 491 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 INO80BQ9C086 356 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-203ENST00000527275 CCDC113Q9H0I3 377 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 C2orf40Q9H1Z8 148 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 AGPAT3Q9NRZ7 376 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 EXOC7Q9UPT5 735 aa20.49■□□□□ 0.87
SMPD1-203ENST00000527275 UQCRHLA0A096LP55 91 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 A0A0U1RQG5 324 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-203ENST00000527275 HNRNPDLO14979 420 aaKnown RBP20.48■□□□□ 0.87
SMPD1-203ENST00000527275 CALUO43852 315 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-203ENST00000527275 EDN1P05305 212 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 UQCRHP07919 91 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 NR2F2P24468 414 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 MNX1P50219 401 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-203ENST00000527275 PTPN11Q06124 597 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-203ENST00000527275 MAPK6Q16659 721 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 MYRIPQ8NFW9 859 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 TTYH3Q9C0H2 523 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 ADAMTS10Q9H324 1103 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 CDHR5Q9HBB8 845 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 PHLPP2Q6ZVD8 1323 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 TUBB4AP04350 444 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 GJA8P48165 433 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 MARSP56192 900 aaKnown RBP20.48■□□□□ 0.87
SMPD1-203ENST00000527275 CDC42EP1Q00587 391 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 MBTD1Q05BQ5 628 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 CYP26C1Q6V0L0 522 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 ZNF410Q86VK4 478 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 MCOLN1Q9GZU1 580 aa20.48■□□□□ 0.87
SMPD1-203ENST00000527275 TTLL13PA6NNM8 815 aa20.47■□□□□ 0.87
SMPD1-203ENST00000527275 ANKRD63C9JTQ0 380 aa20.47■□□□□ 0.87
SMPD1-203ENST00000527275 ARVCFO00192 962 aa20.47■□□□□ 0.87
SMPD1-203ENST00000527275 NR3C1P04150 777 aa20.47■□□□□ 0.87
SMPD1-203ENST00000527275 TSR1Q2NL82 804 aaKnown RBP20.47■□□□□ 0.87
SMPD1-203ENST00000527275 FIGNQ5HY92 759 aa20.47■□□□□ 0.87
SMPD1-203ENST00000527275 SLC39A4Q6P5W5 647 aa20.47■□□□□ 0.87
SMPD1-203ENST00000527275 IFNLR1Q8IU57 520 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms