RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 PLS3P13797 630 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 MARCKSP29966 332 aaPredicted RBP11.86□□□□□ -0.51
SYVN1-208ENST00000527142 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
SYVN1-208ENST00000527142 PEX3P56589 373 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 KRT17Q04695 432 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 CAMK1Q14012 370 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 KARSQ15046 597 aaKnown RBP11.86□□□□□ -0.51
SYVN1-208ENST00000527142 TMEM132AQ24JP5 1023 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 DCAF4L1Q3SXM0 396 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 TCEAL5Q5H9L2 206 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 ATL3Q6DD88 541 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 SLC39A11Q8N1S5 342 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 POF1BQ8WVV4 589 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 RAD54LQ92698 747 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 ASB2Q96Q27 587 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 PLIN2Q99541 437 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 ADPGKQ9BRR6 497 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 KIFC3Q9BVG8 833 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 NXF3Q9H4D5 531 aaKnown RBP11.86□□□□□ -0.51
SYVN1-208ENST00000527142 PDZD7Q9H5P4 517 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 TMEM134Q9H6X4 195 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 UBE2ZQ9H832 354 aaPredicted RBP11.86□□□□□ -0.51
SYVN1-208ENST00000527142 KMT5AQ9NQR1 393 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 TLR9Q9NR96 1032 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 PUF60Q9UHX1 559 aaKnown RBP11.86□□□□□ -0.51
SYVN1-208ENST00000527142 INPP5FQ9Y2H2 1132 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 GIT1Q9Y2X7 761 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 MYO7AQ13402 2215 aa11.86□□□□□ -0.51
SYVN1-208ENST00000527142 ARL5CA6NH57 179 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 CCDC169A6NNP5 214 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 K7ERI5 159 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 NPTXRO95502 500 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 F13A1P00488 732 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 COL9A1P20849 921 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 DNAJB1P25685 340 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 SMTNP53814 917 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 BCAR1P56945 870 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 CEBPZQ03701 1054 aaKnown RBP11.85□□□□□ -0.51
SYVN1-208ENST00000527142 STK38Q15208 465 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 LONRF3Q496Y0 759 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 GPBP1Q86WP2 473 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 LINC00301Q8NCQ3 95 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 MRPS27Q92552 414 aaKnown RBP11.85□□□□□ -0.51
SYVN1-208ENST00000527142 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
SYVN1-208ENST00000527142 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
SYVN1-208ENST00000527142 KCNN1Q92952 543 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 PABPC5Q96DU9 382 aaKnown RBP11.85□□□□□ -0.51
SYVN1-208ENST00000527142 TMEM175Q9BSA9 504 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 NTPCRQ9BSD7 190 aaKnown RBP11.85□□□□□ -0.51
SYVN1-208ENST00000527142 NGRNQ9NPE2 291 aaKnown RBP11.85□□□□□ -0.51
SYVN1-208ENST00000527142 BLOC1S4Q9NUP1 217 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 LARSQ9P2J5 1176 aaKnown RBP11.85□□□□□ -0.51
SYVN1-208ENST00000527142 CCDC39Q9UFE4 941 aa11.85□□□□□ -0.51
SYVN1-208ENST00000527142 FSCN2O14926 492 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 PPP6R2O75170 966 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 ABCD1P33897 745 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 PBX3P40426 434 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 MLH1P40692 756 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 ZNF131P52739 623 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 ARSHQ5FYA8 562 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 ATF7IP2Q5U623 682 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 CCDC73Q6ZRK6 1079 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 TMEM161BQ8NDZ6 487 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 KCNG4Q8TDN1 519 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 LRRC15Q8TF66 581 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 TMEM169Q96HH4 297 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 EPSTI1Q96J88 318 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 CLIC6Q96NY7 704 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 REEP2Q9BRK0 252 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
SYVN1-208ENST00000527142 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 TNFSF13BQ9Y275 285 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 HES2Q9Y543 173 aa11.84□□□□□ -0.51
SYVN1-208ENST00000527142 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.83□□□□□ -0.52
SYVN1-208ENST00000527142 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 SPTLC2O15270 562 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 SLC16A4O15374 487 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 TBCAO75347 108 aaKnown RBP11.83□□□□□ -0.52
SYVN1-208ENST00000527142 EDN1P05305 212 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 GALTP07902 379 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 MAPTP10636 758 aaKnown RBP11.83□□□□□ -0.52
SYVN1-208ENST00000527142 LIG1P18858 919 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 DDIT3P35638 169 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 TFF2Q03403 129 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 DSC1Q08554 894 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 HYAL1Q12794 435 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 GRIK3Q13003 919 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 STRN3Q13033 797 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 MCM6Q14566 821 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 BMS1Q14692 1282 aaKnown RBP11.83□□□□□ -0.52
SYVN1-208ENST00000527142 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 LEXMQ3ZCV2 418 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 NT5DC1Q5TFE4 455 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 USP49Q70CQ1 688 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 CDR2LQ86X02 465 aaPredicted RBP11.83□□□□□ -0.52
SYVN1-208ENST00000527142 EFHBQ8N7U6 833 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 IGSF21Q96ID5 467 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 ZFP42Q96MM3 310 aa11.83□□□□□ -0.52
SYVN1-208ENST00000527142 FAM193BQ96PV7 902 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms