RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 SIX5Q8N196 739 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 RNF149Q8NC42 400 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 TCP11Q8WWU5 503 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 HERC2P3Q9BVR0 1158 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 RHOBTB2Q9BYZ6 727 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 WDR6Q9NNW5 1121 aaKnown RBP17.98■□□□□ 0.47
PTPRU-210ENST00000527027 MAN1C1Q9NR34 630 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 MARCH5Q9NX47 278 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 KCNJ14Q9UNX9 436 aa17.98■□□□□ 0.47
PTPRU-210ENST00000527027 PRG3Q9Y2Y8 225 aaPredicted RBP17.98■□□□□ 0.47
PTPRU-210ENST00000527027 CCDC194A0A1B0GVG4 234 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 INPPL1O15357 1258 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 N4BP1O75113 896 aaKnown RBP17.97■□□□□ 0.47
PTPRU-210ENST00000527027 ERLIN2O94905 339 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 EFEMP2O95967 443 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 GCFC2P16383 781 aaKnown RBP17.97■□□□□ 0.47
PTPRU-210ENST00000527027 AXLP30530 894 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 YWHABP31946 246 aaKnown RBP17.97■□□□□ 0.47
PTPRU-210ENST00000527027 PCBP1Q15365 356 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTPRU-210ENST00000527027 ANGPT1Q15389 498 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 NEK8Q86SG6 692 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 FERMT3Q86UX7 667 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 DTWD2Q8NBA8 298 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 STAMQ92783 540 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 HAS1Q92839 578 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 LXNQ9BS40 222 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 RXFP1Q9HBX9 757 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 BMP2KQ9NSY1 1161 aaPredicted RBP17.97■□□□□ 0.47
PTPRU-210ENST00000527027 WNT16Q9UBV4 365 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 IPPQ9Y573 584 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 CYP46A1Q9Y6A2 500 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 GVINP1Q7Z2Y8 2422 aa17.97■□□□□ 0.47
PTPRU-210ENST00000527027 ARL5CA6NH57 179 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 TBX3O15119 743 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 NR1I2O75469 434 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 GLUD1P00367 558 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 GBP2P32456 591 aaPredicted RBP17.96■□□□□ 0.47
PTPRU-210ENST00000527027 GLUD2P49448 558 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 DSC1Q08554 894 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 NCBP1Q09161 790 aaKnown RBP17.96■□□□□ 0.47
PTPRU-210ENST00000527027 STK3Q13188 491 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 EMC2Q15006 297 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 XKR9Q5GH70 373 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 RNF168Q8IYW5 571 aaPredicted RBP17.96■□□□□ 0.47
PTPRU-210ENST00000527027 ADSSL1Q8N142 457 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 HDAC7Q8WUI4 952 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 CCDC51Q96ER9 411 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 GAD1Q99259 594 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 LARP6Q9BRS8 491 aaKnown RBP17.96■□□□□ 0.47
PTPRU-210ENST00000527027 PHF20Q9BVI0 1012 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 EIF2AQ9BY44 585 aaKnown RBP17.96■□□□□ 0.47
PTPRU-210ENST00000527027 ZSWIM4Q9H7M6 989 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 RGL1Q9NZL6 768 aa17.96■□□□□ 0.47
PTPRU-210ENST00000527027 STK25O00506 426 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 NARSO43776 548 aaKnown RBP17.95■□□□□ 0.46
PTPRU-210ENST00000527027 MARCH6O60337 910 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 CCNT1O60563 726 aaKnown RBP17.95■□□□□ 0.46
PTPRU-210ENST00000527027 TSPAN1O60635 241 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 C1RP00736 705 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 MLH1P40692 756 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 PTENP60484 403 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 DSG1Q02413 1049 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 POU5F1BQ06416 359 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 MXD4Q14582 209 aaPredicted RBP17.95■□□□□ 0.46
PTPRU-210ENST00000527027 NOTUMQ6P988 496 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 SLC44A3Q8N4M1 653 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 RSAD2Q8WXG1 361 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 SMG7Q92540 1137 aaKnown RBP17.95■□□□□ 0.46
PTPRU-210ENST00000527027 NXPE3Q969Y0 559 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 DYDC2Q96IM9 177 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 NAP1L4Q99733 375 aaKnown RBP17.95■□□□□ 0.46
PTPRU-210ENST00000527027 CSRNP2Q9H175 543 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 CHST7Q9NS84 486 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 MIOSQ9NXC5 875 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 EPS15L1Q9UBC2 864 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 ZNF292O60281 2723 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 CLUHO75153 1309 aa17.95■□□□□ 0.46
PTPRU-210ENST00000527027 ZBTB39O15060 712 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 EPB41L2O43491 1005 aaKnown RBP17.94■□□□□ 0.46
PTPRU-210ENST00000527027 RFPL2O75678 378 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 CFHP08603 1231 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 MYBP10242 640 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 SCNN1GP51170 649 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 NCAPH2Q6IBW4 605 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 ZFP42Q96MM3 310 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 MYADMQ96S97 322 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 MTRQ99707 1265 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 COLEC11Q9BWP8 271 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 PLEKHA4Q9H4M7 779 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 GIT1Q9Y2X7 761 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 HES2Q9Y543 173 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 DENND4AQ7Z401 1863 aa17.94■□□□□ 0.46
PTPRU-210ENST00000527027 KRBA1A5PL33 1030 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 INO80B-WBP1J3KQ70 363 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 PAPLNO95428 1278 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 SPATA31D3P0C874 917 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 XBP1P17861 261 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 TFDP1Q14186 410 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms