RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PFASO15067 1338 aa18.99■□□□□ 0.63
USH1C-205ENST00000527020 RGS20O76081 388 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 NR3C2P08235 984 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 FDX1P10109 184 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 CNGA1P29973 690 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 BACE1P56817 501 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 SKOR1P84550 965 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 UAP1Q16222 522 aaPredicted RBP18.98■□□□□ 0.63
USH1C-205ENST00000527020 RHOT2Q8IXI1 618 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 MICALL2Q8IY33 904 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 SLC17A8Q8NDX2 589 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 RDM1Q8NG50 284 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 SLC16A10Q8TF71 515 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 RNPC3Q96LT9 517 aaKnown RBP18.98■□□□□ 0.63
USH1C-205ENST00000527020 ACP6Q9NPH0 428 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 PNMA2Q9UL42 364 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 DIS3Q9Y2L1 958 aaKnown RBP18.98■□□□□ 0.63
USH1C-205ENST00000527020 PCDHA10Q9Y5I2 948 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 PPFIA4O75335 1185 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 RPS12P25398 132 aaKnown RBP18.98■□□□□ 0.63
USH1C-205ENST00000527020 KCTD16Q68DU8 428 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 XRRA1Q6P2D8 792 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 PARD3BQ8TEW8 1205 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 GPRASP2Q96D09 838 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 HVCN1Q96D96 273 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 POP1Q99575 1024 aaKnown RBP18.98■□□□□ 0.63
USH1C-205ENST00000527020 CAPS2Q9BXY5 557 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 COQ4Q9Y3A0 265 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 ALG6Q9Y672 507 aa18.98■□□□□ 0.63
USH1C-205ENST00000527020 MYH9P35579 1960 aaKnown RBP18.97■□□□□ 0.63
USH1C-205ENST00000527020 ADGRA3Q8IWK6 1321 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 DENND3A2RUS2 1198 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 DAPK3O43293 454 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 KCNA2P16389 499 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 CCND2P30279 289 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 FLT3P36888 993 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 HSD17B3P37058 310 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 USP8P40818 1118 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 GMPSP49915 693 aaPredicted RBP18.97■□□□□ 0.63
USH1C-205ENST00000527020 DALRD3Q5D0E6 543 aaKnown RBP18.97■□□□□ 0.63
USH1C-205ENST00000527020 DNAJC21Q5F1R6 531 aaKnown RBP18.97■□□□□ 0.63
USH1C-205ENST00000527020 NAA35Q5VZE5 725 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 SHC3Q92529 594 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 NTPCRQ9BSD7 190 aaKnown RBP18.97■□□□□ 0.63
USH1C-205ENST00000527020 ERVK-5Q9HDB9 667 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 TCEAL9Q9UHQ7 104 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 EXOC7Q9UPT5 735 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 PLAAQ9Y263 795 aa18.97■□□□□ 0.63
USH1C-205ENST00000527020 H0YGN5 161 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 CYP26A1O43174 497 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 RTN2O75298 545 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 PTENP60484 403 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 TGFB2P61812 414 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 DMP1Q13316 513 aaPredicted RBP18.96■□□□□ 0.63
USH1C-205ENST00000527020 ZNF211Q13398 564 aaPredicted RBP18.96■□□□□ 0.63
USH1C-205ENST00000527020 C11orf63Q6NUN7 778 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 NLRX1Q86UT6 975 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 SLC47A2Q86VL8 602 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 SCYL3Q8IZE3 742 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 CCDC26Q8TAB7 109 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 HELQQ8TDG4 1101 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
USH1C-205ENST00000527020 CCDC127Q96BQ5 260 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 FBXL18Q96ME1 805 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 TOPORSQ9NS56 1045 aaPredicted RBP18.96■□□□□ 0.63
USH1C-205ENST00000527020 TMOD4Q9NZQ9 345 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 GABBR1Q9UBS5 961 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 ZNF112Q9UJU3 913 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 ZNF214Q9UL59 606 aaPredicted RBP18.96■□□□□ 0.63
USH1C-205ENST00000527020 ADAMTS5Q9UNA0 930 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 NFS1Q9Y697 457 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 SMTNP53814 917 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 GPC5P78333 572 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 KRT39Q6A163 491 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 SNRNP48Q6IEG0 339 aaKnown RBP18.96■□□□□ 0.63
USH1C-205ENST00000527020 AADACL2Q6P093 401 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 MAATS1Q7Z4T9 603 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 SRLQ86TD4 932 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 PPM1KQ8N3J5 372 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 C1orf131Q8NDD1 294 aaKnown RBP18.96■□□□□ 0.63
USH1C-205ENST00000527020 SPIRE2Q8WWL2 714 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 KRT35Q92764 455 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 MFSD14AQ96MC6 490 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 KMT5AQ9NQR1 393 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 PDLIM7Q9NR12 457 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 CTTNBP2NLQ9P2B4 639 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 FZD1Q9UP38 647 aa18.96■□□□□ 0.63
USH1C-205ENST00000527020 PTPRAP18433 802 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 COPB2P35606 906 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 MARCKSL1P49006 195 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 GPC3P51654 580 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 GNGT1P63211 74 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 FMO1Q01740 532 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 ATP8B4Q8TF62 1192 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 CEP170P1Q96L14 293 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 TMEM8AQ9HCN3 771 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 CHORDC1Q9UHD1 332 aaPredicted RBP18.95■□□□□ 0.62
USH1C-205ENST00000527020 EIF3HO15372 352 aaKnown RBP eCLIP18.95■□□□□ 0.62
USH1C-205ENST00000527020 MTA2O94776 668 aa18.95■□□□□ 0.62
USH1C-205ENST00000527020 MMEP08473 750 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms