RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CGNQ9P2M7 1197 aaKnown RBP18.11■□□□□ 0.49
CAPN1-205ENST00000526954 USP20Q9Y2K6 914 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 STYXL1Q9Y6J8 313 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 ZMYM2Q9UBW7 1377 aa18.11■□□□□ 0.49
CAPN1-205ENST00000526954 PPP1R3GB7ZBB8 358 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 ANKRD63C9JTQ0 380 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 ABLIM1O14639 778 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 HNRNPDLO14979 420 aaKnown RBP18.1■□□□□ 0.49
CAPN1-205ENST00000526954 MGEA5O60502 916 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 CD44P16070 742 aaKnown RBP18.1■□□□□ 0.49
CAPN1-205ENST00000526954 LIG4P49917 911 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 STIM1Q13586 685 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 IKBKEQ14164 716 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 SLFN12LQ6IEE8 588 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 SLC39A4Q6P5W5 647 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 SASS6Q6UVJ0 657 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 RTN4RL1Q86UN2 441 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-205ENST00000526954 DHTKD1Q96HY7 919 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-205ENST00000526954 ADAM2Q99965 735 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 RGS18Q9NS28 235 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 PCDH10Q9P2E7 1040 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 MAPK8IP1Q9UQF2 711 aa18.1■□□□□ 0.49
CAPN1-205ENST00000526954 ABHD14A-ACY1A0A1B0GW23 586 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 RBAK-RBAKDNI3L0D1 243 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 PDXKO00764 312 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 ENPP3O14638 875 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 TGFB1I1O43294 461 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 EFCAB14O75071 495 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 ACRP10323 421 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 TMEM132AQ24JP5 1023 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 ZSCAN23Q3MJ62 389 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 CT47A1Q5JQC4 288 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-205ENST00000526954 UBXN11Q5T124 520 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 EEF1DP3Q658K8 133 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 TWF2Q6IBS0 349 aaKnown RBP18.09■□□□□ 0.49
CAPN1-205ENST00000526954 CENPPQ6IPU0 288 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 SLC27A1Q6PCB7 646 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 MPZL3Q6UWV2 235 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 APBB1IPQ7Z5R6 666 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-205ENST00000526954 GOLGA5Q8TBA6 731 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 TMEM174Q8WUU8 243 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 LINC01599Q8WXQ3 324 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 ADPGKQ9BRR6 497 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 IKZF4Q9H2S9 585 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 C1orf112Q9NSG2 853 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 TYW1Q9NV66 732 aaKnown RBP18.09■□□□□ 0.49
CAPN1-205ENST00000526954 TRAF3IP3Q9Y228 551 aa18.09■□□□□ 0.49
CAPN1-205ENST00000526954 TTC3P53804 2025 aa18.08■□□□□ 0.49
CAPN1-205ENST00000526954 TNRC18O15417 2968 aaPredicted RBP18.08■□□□□ 0.49
CAPN1-205ENST00000526954 PSMA7O14818 248 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 CLDN3O15551 220 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 ZNF623O75123 536 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 BAIAP3O94812 1187 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 FGBP02675 491 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 ACTN1P12814 892 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 GARTP22102 1010 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 MAGEA10P43363 369 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-205ENST00000526954 EPHB4P54760 987 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 FAM189BP81408 668 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 MCL1Q07820 350 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 DPCR1Q3MIW9 517 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 DCAF4L1Q3SXM0 396 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 TMEM240Q5SV17 173 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 PSRC1Q6PGN9 363 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-205ENST00000526954 FOXR2Q6PJQ5 311 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 SLC24A5Q71RS6 500 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 HS2ST1Q7LGA3 356 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 C12orf56Q8IXR9 622 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 ZBTB45Q96K62 511 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-205ENST00000526954 FUCA2Q9BTY2 467 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 SEMA6BQ9H3T3 888 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 ANO10Q9NW15 660 aa18.08■□□□□ 0.48
CAPN1-205ENST00000526954 A0A0B4J269 797 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 A0A0U1RQF3 1178 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-205ENST00000526954 SYCE3A1L190 88 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 TISP43B9A030 160 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 C9IYK1 514 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 H0YGN5 161 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 MCF2P10911 925 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 SKIP12755 728 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 CCNE1P24864 410 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 ADSSP30520 456 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 RAB27AP51159 221 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 MLLT1Q03111 559 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-205ENST00000526954 TYRO3Q06418 890 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 STX1AQ16623 288 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 NFIL3Q16649 462 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 ZCWPW2Q504Y3 356 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 ZNF365Q70YC5 407 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 CDR2LQ86X02 465 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-205ENST00000526954 P2RX5Q93086 422 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 TCHPQ9BT92 498 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 EIF2AQ9BY44 585 aaKnown RBP18.07■□□□□ 0.48
CAPN1-205ENST00000526954 HAPLN2Q9GZV7 340 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 CDT1Q9H211 546 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 AGPAT3Q9NRZ7 376 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 FAM105AQ9NUU6 356 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 DACH1Q9UI36 760 aa18.07■□□□□ 0.48
CAPN1-205ENST00000526954 KIAA0391O15091 583 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms