RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 N4BP1O75113 896 aaKnown RBP12.22□□□□□ -0.45
NEDD8-204ENST00000526430 CXCL14O95715 111 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 GCFC2P16383 781 aaKnown RBP12.22□□□□□ -0.45
NEDD8-204ENST00000526430 ATP2B1P20020 1258 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 ZNF76P36508 570 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 TRAPPC10P48553 1259 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 POLGP54098 1239 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-204ENST00000526430 PTPAQ15257 358 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 TTC38Q5R3I4 469 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 FEZF2Q8TBJ5 459 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 GPR152Q8TDT2 470 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 RHOBTB2Q9BYZ6 727 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 PARD6AQ9NPB6 346 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 SLC2A4RGQ9NR83 387 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 RNF19AQ9NV58 838 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 ZSCAN32Q9NX65 697 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 DDX25Q9UHL0 483 aaKnown RBP12.22□□□□□ -0.45
NEDD8-204ENST00000526430 VAV3Q9UKW4 847 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 NOC2LQ9Y3T9 749 aaKnown RBP12.22□□□□□ -0.45
NEDD8-204ENST00000526430 SPAG17Q6Q759 2223 aa12.22□□□□□ -0.45
NEDD8-204ENST00000526430 IGF2RP11717 2491 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 IGKV6D-21A0A0A0MT36 114 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 EML1O00423 815 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 TBX3O15119 743 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 LAMTOR5O43504 91 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 F13A1P00488 732 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 HSP90AA1P07900 732 aaKnown RBP12.21□□□□□ -0.45
NEDD8-204ENST00000526430 CTSAP10619 480 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 MCM7P33993 719 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 MAGEA9P43362 315 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 STARD6P59095 220 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 DSC3Q14574 896 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 RILPL1Q5EBL4 403 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 FOXD4L5Q5VV16 416 aaPredicted RBP12.21□□□□□ -0.45
NEDD8-204ENST00000526430 CYP26C1Q6V0L0 522 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 BRAPQ7Z569 592 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 ABI1Q8IZP0 508 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 TMEM87AQ8NBN3 555 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 TMEM40Q8WWA1 233 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 RSAD2Q8WXG1 361 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 FOXD4L4Q8WXT5 416 aaPredicted RBP12.21□□□□□ -0.45
NEDD8-204ENST00000526430 DDX1Q92499 740 aaKnown RBP12.21□□□□□ -0.45
NEDD8-204ENST00000526430 CDHR1Q96JP9 859 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 RIT2Q99578 217 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 ST3GAL5Q9UNP4 418 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 CLIC4Q9Y696 253 aa12.21□□□□□ -0.45
NEDD8-204ENST00000526430 LRP3O75074 770 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 PDIA4P13667 645 aaKnown RBP12.2□□□□□ -0.46
NEDD8-204ENST00000526430 ATP4AP20648 1035 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 PMLP29590 882 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 SETQ01105 290 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-204ENST00000526430 PTGDRQ13258 359 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 DCLRE1AQ6PJP8 1040 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 ABHD15Q6UXT9 468 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 VPS52Q8N1B4 723 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 CMASQ8NFW8 434 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-204ENST00000526430 STAMQ92783 540 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 TMEM169Q96HH4 297 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 SHDQ96IW2 340 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 USP28Q96RU2 1077 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 BCO2Q9BYV7 579 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 OSBPL6Q9BZF3 934 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 UNC45AQ9H3U1 944 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 ZSCAN16Q9H4T2 348 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-204ENST00000526430 GMEB2Q9UKD1 530 aa12.2□□□□□ -0.46
NEDD8-204ENST00000526430 DDX39AO00148 427 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 STBD1O95210 358 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 PROS1P07225 676 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 CA8P35219 290 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 ALDH7A1P49419 539 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 ACTR2P61160 394 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 GRIN1Q05586 938 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 ORC2Q13416 577 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 MTHFD1LQ6UB35 978 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 DDX53Q86TM3 631 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 RSPH1Q8WYR4 309 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 FAM20AQ96MK3 541 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 IPO9Q96P70 1041 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 DDX23Q9BUQ8 820 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 MRPL9Q9BYD2 267 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 FAM126AQ9BYI3 521 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 FOXQ1Q9C009 403 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 WDR6Q9NNW5 1121 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 TBC1D22BQ9NU19 505 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 SPATA6Q9NWH7 488 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 TFIP11Q9UBB9 837 aaKnown RBP12.19□□□□□ -0.46
NEDD8-204ENST00000526430 SLC9A2Q9UBY0 812 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 COL4A3Q01955 1670 aa12.19□□□□□ -0.46
NEDD8-204ENST00000526430 NBEAQ8NFP9 2946 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 CLUHO75153 1309 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 FLNBO75369 2602 aaKnown RBP12.18□□□□□ -0.46
NEDD8-204ENST00000526430 TCHHQ07283 1943 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 SOBPA7XYQ1 873 aa12.18□□□□□ -0.46
NEDD8-204ENST00000526430 NEMFO60524 1076 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms