RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 GAD1Q99259 594 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 POLR3CQ9BUI4 534 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-210ENST00000525990 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 CXCL16Q9H2A7 254 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 MARCH5Q9NX47 278 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 DBR1Q9UK59 544 aaKnown RBP13.38□□□□□ -0.27
SSBP3-210ENST00000525990 VWA8A3KMH1 1905 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 TECTAO75443 2155 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 KMT2EQ8IZD2 1858 aa13.38□□□□□ -0.27
SSBP3-210ENST00000525990 MTCL1Q9Y4B5 1905 aaKnown RBP13.37□□□□□ -0.27
SSBP3-210ENST00000525990 MYO10Q9HD67 2058 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 ARL5CA6NH57 179 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 LOC730098B7Z3J9 87 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 NRP1O14786 923 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 NPTXRO95502 500 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 ITGA4P13612 1032 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 RPA1P27694 616 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 CDC25AP30304 524 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 TAS1R1Q7RTX1 841 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 DDX53Q86TM3 631 aaKnown RBP13.37□□□□□ -0.27
SSBP3-210ENST00000525990 KIFC3Q9BVG8 833 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 KLK14Q9P0G3 267 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 PRG3Q9Y2Y8 225 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-210ENST00000525990 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
SSBP3-210ENST00000525990 CTSAP10619 480 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.271e-7■□□□□ 8.9
SSBP3-210ENST00000525990 AXLP30530 894 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
SSBP3-210ENST00000525990 POU5F1BQ06416 359 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 PTGDRQ13258 359 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 CBX2Q14781 532 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-210ENST00000525990 RABEP1Q15276 862 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 PTPN14Q15678 1187 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 CDCA2Q69YH5 1023 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-210ENST00000525990 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 COLGALT2Q8IYK4 626 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 GSTCDQ8NEC7 633 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 TMX3Q96JJ7 454 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 NACC1Q96RE7 527 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
SSBP3-210ENST00000525990 PHF7Q9BWX1 381 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-210ENST00000525990 NFKBIZQ9BYH8 718 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 BHMT2Q9H2M3 363 aa13.36□□□□□ -0.27
SSBP3-210ENST00000525990 PDCD11Q14690 1871 aaKnown RBP13.36□□□□□ -0.27
SSBP3-210ENST00000525990 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 E9PMD0 336 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 C2CD2LO14523 706 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 MYBP10242 640 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 ALADP13716 330 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 LIG1P18858 919 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 OR1G1P47890 313 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.278e-6■■■■□ 21.8
SSBP3-210ENST00000525990 DSC1Q08554 894 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-210ENST00000525990 RARS2Q5T160 578 aaKnown RBP13.35□□□□□ -0.27
SSBP3-210ENST00000525990 EEF1DP3Q658K8 133 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 SLC27A1Q6PCB7 646 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 IGSF22Q8N9C0 903 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 ERMNQ8TAM6 284 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 B3GALT6Q96L58 329 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 FAM193BQ96PV7 902 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-210ENST00000525990 PAAF1Q9BRP4 392 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 TRIM6Q9C030 488 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-210ENST00000525990 CCDC113Q9H0I3 377 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 POMKQ9H5K3 350 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 DDX19AQ9NUU7 478 aaKnown RBP13.35□□□□□ -0.27
SSBP3-210ENST00000525990 LRWD1Q9UFC0 647 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 NOL7Q9UMY1 257 aaKnown RBP13.35□□□□□ -0.27
SSBP3-210ENST00000525990 KIAA1024Q9UPX6 916 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 FAN1Q9Y2M0 1017 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 CITO14578 2027 aa13.35□□□□□ -0.27
SSBP3-210ENST00000525990 A0A1B0GUA9 196 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 PRR33A8MZF0 331 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 INPPL1O15357 1258 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 CYP11B2P19099 503 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 GJB2P29033 226 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 TRAPPC10P48553 1259 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 HERC4Q5GLZ8 1057 aaPredicted RBP13.34□□□□□ -0.27
SSBP3-210ENST00000525990 MCTP1Q6DN14 999 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 HFE2Q6ZVN8 426 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 KCNK18Q7Z418 384 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 MCPH1Q8NEM0 835 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 SNX29Q8TEQ0 813 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 SLC22A17Q8WUG5 538 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 CASP10Q92851 521 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 TMEM175Q9BSA9 504 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 MMTAG2Q9BU76 263 aaKnown RBP13.34□□□□□ -0.27
SSBP3-210ENST00000525990 FZD8Q9H461 694 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 PDZD7Q9H5P4 517 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.34□□□□□ -0.27
SSBP3-210ENST00000525990 IRAK3Q9Y616 596 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
SSBP3-210ENST00000525990 ZNF318Q5VUA4 2279 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 ST18O60284 1047 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 LILRB3O75022 631 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 EFEMP2O95967 443 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 ALDH2P05091 517 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 PRKCBP05771 671 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms