RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 MLLT6P55198 1093 aaPredicted RBP5.84□□□□□ -1.47
CD44-220ENST00000525688 TRIM68Q6AZZ1 485 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 PPP4R4Q6NUP7 873 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 FAM180AQ6UWF9 173 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 OVCH2Q7RTZ1 564 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 GRAMD1CQ8IYS0 662 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 MARCH10Q8NA82 808 aaPredicted RBP5.84□□□□□ -1.47
CD44-220ENST00000525688 GPR156Q8NFN8 814 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 HDAC10Q969S8 669 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 WDR92Q96MX6 357 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 SGPP1Q9BX95 441 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 TMEM60Q9H2L4 133 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 SWAP70Q9UH65 585 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 FBXO9Q9UK97 447 aaPredicted RBP5.84□□□□□ -1.47
CD44-220ENST00000525688 CROTQ9UKG9 612 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 VWA7Q9Y334 891 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 CFAP20Q9Y6A4 193 aaKnown RBP5.84□□□□□ -1.47
CD44-220ENST00000525688 RIMBP3CA6NJZ7 1639 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 RIMBP3BA6NNM3 1639 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 RIMBP3Q9UFD9 1639 aa5.84□□□□□ -1.47
CD44-220ENST00000525688 RPTORQ8N122 1335 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 A6NNZ2 444 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 FAM171A2A8MVW0 826 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 TMEM127O75204 238 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 FSBPO95073 299 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 LY86O95711 162 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 ZBED1O96006 694 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 ZNF28P17035 718 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 CD69Q07108 199 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 MGAT5Q09328 741 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 TOP3AQ13472 1001 aaPredicted RBP5.83□□□□□ -1.48
CD44-220ENST00000525688 MYBPC2Q14324 1141 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 DHX8Q14562 1220 aaKnown RBP5.83□□□□□ -1.48
CD44-220ENST00000525688 SAFBQ15424 915 aaKnown RBP eCLIP5.83□□□□□ -1.48
CD44-220ENST00000525688 C3orf36Q3SXR2 165 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 C19orf54Q5BKX5 351 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 SYCP2LQ5T4T6 812 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 OTOP2Q7RTS6 562 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 NBPF11Q86T75 865 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 DENND1CQ8IV53 801 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 TMEFF1Q8IYR6 380 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 UNC5BQ8IZJ1 945 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 ZBTB34Q8NCN2 500 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 FBXO15Q8NCQ5 510 aaPredicted RBP5.83□□□□□ -1.48
CD44-220ENST00000525688 RIN2Q8WYP3 895 aaPredicted RBP5.83□□□□□ -1.48
CD44-220ENST00000525688 ZCCHC14Q8WYQ9 949 aaKnown RBP5.83□□□□□ -1.48
CD44-220ENST00000525688 HOXB13Q92826 284 aaPredicted RBP5.83□□□□□ -1.48
CD44-220ENST00000525688 ZBTB8AQ96BR9 441 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 FAM204AQ9H8W3 233 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 DMRT3Q9NQL9 472 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 INTUQ9ULD6 942 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 CEP170Q5SW79 1584 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 RUSC2Q8N2Y8 1516 aa5.83□□□□□ -1.48
CD44-220ENST00000525688 CUL7Q14999 1698 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 LRRC10BA6NIK2 292 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 FAM227AF5H4B4 570 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 PHF2O75151 1096 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 KLHL18O94889 574 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 GAAP10253 952 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 RHCEP18577 417 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 CTSSP25774 331 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 IL13P35225 146 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 ADCY8P40145 1251 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 IL12RB1P42701 662 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 ETV4P43268 484 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 LIMS1P48059 325 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 IRAK1P51617 712 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 SESN2P58004 480 aaPredicted RBP5.82□□□□□ -1.48
CD44-220ENST00000525688 DLG4P78352 724 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 CAP1Q01518 475 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 RHDQ02161 417 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 DSC2Q02487 901 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 MLANAQ16655 118 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 PPP4R3AQ6IN85 833 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 MIGA2Q7L4E1 593 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 PCGF5Q86SE9 256 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 KIAA0319LQ8IZA0 1049 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 OR2I1PQ8NGU4 316 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD44-220ENST00000525688 KCNK12Q9HB15 430 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 SPATA6Q9NWH7 488 aaPredicted RBP5.82□□□□□ -1.48
CD44-220ENST00000525688 MAGEL2Q9UJ55 1249 aa5.82□□□□□ -1.48
CD44-220ENST00000525688 CARMIL1Q5VZK9 1371 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 TPP1O14773 563 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 SGTAO43765 313 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 B3GALT2O43825 422 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 UBXN7O94888 489 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 PLA2G1BP04054 148 aaKnown RBP5.81□□□□□ -1.48
CD44-220ENST00000525688 ALDH2P05091 517 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 RPLP2P05387 115 aaKnown RBP5.81□□□□□ -1.48
CD44-220ENST00000525688 LTA4HP09960 611 aaKnown RBP5.81□□□□□ -1.48
CD44-220ENST00000525688 RPL13P26373 211 aaKnown RBP5.81□□□□□ -1.48
CD44-220ENST00000525688 AGFG1P52594 562 aaKnown RBP5.81□□□□□ -1.48
CD44-220ENST00000525688 SMAD4Q13485 552 aaKnown RBP5.81□□□□□ -1.48
CD44-220ENST00000525688 PICALMQ13492 652 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 SAFB2Q14151 953 aaKnown RBP eCLIP5.81□□□□□ -1.48
CD44-220ENST00000525688 COBLL1Q53SF7 1204 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 TRMT10BQ6PF06 316 aaKnown RBP5.81□□□□□ -1.48
CD44-220ENST00000525688 TAS1R1Q7RTX1 841 aa5.81□□□□□ -1.48
CD44-220ENST00000525688 CAMKK1Q8N5S9 505 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms