RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 RNASELQ05823 741 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 PRPF4BQ13523 1007 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 LEXMQ3ZCV2 418 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 CALML4Q96GE6 196 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 DRC1Q96MC2 740 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 APOL6Q9BWW8 343 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 GBP3Q9H0R5 595 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 PDZD7Q9H5P4 517 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 UBN1Q9NPG3 1134 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 USP20Q9Y2K6 914 aa20.42■□□□□ 0.86
TSPAN4-215ENST00000525334 TCF20Q9UGU0 1960 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 ACKR2O00590 384 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 FSCN2O14926 492 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 NCK2O43639 380 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 GTF2F1P35269 517 aaKnown RBP eCLIP20.41■□□□□ 0.865e-7■■■■■ 34.9
TSPAN4-215ENST00000525334 MLH1P40692 756 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 NPTX2P47972 431 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 EFNA5P52803 228 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 PEX3P56589 373 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 RAD51AP2Q09MP3 1159 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 DMP1Q13316 513 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 TMEM132AQ24JP5 1023 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 EP400NLQ6ZTU2 488 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 TMEM173Q86WV6 379 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 ZNF280BQ86YH2 543 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 MICAL1Q8TDZ2 1067 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 LRRC15Q8TF66 581 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 PPP2R3CQ969Q6 453 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 USP28Q96RU2 1077 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 TIPINQ9BVW5 301 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 IGFLR1Q9H665 355 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 CLDND1Q9NY35 253 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 DNAJB4Q9UDY4 337 aa20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 PUF60Q9UHX1 559 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 FBXO2Q9UK22 296 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-215ENST00000525334 BDP1A6H8Y1 2624 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 ARL5CA6NH57 179 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 CCDC169A6NNP5 214 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 N4BP3O15049 544 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 INPPL1O15357 1258 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 DDHD2O94830 711 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 POMCP01189 267 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 PLCG1P19174 1290 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 KRT17Q04695 432 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 KARSQ15046 597 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 HACE1Q8IYU2 909 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 RASSF8Q8NHQ8 419 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 NECAB3Q96P71 396 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 GAD1Q99259 594 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 KANSL3Q9P2N6 904 aa20.4■□□□□ 0.86
TSPAN4-215ENST00000525334 PHLPP2Q6ZVD8 1323 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 SFI1A8K8P3 1242 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 H3BQ06 376 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 GALTP07902 379 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 AKAP5P24588 427 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 NRIP1P48552 1158 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 SLC11A1P49279 550 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 CTC1Q2NKJ3 1217 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 SPECC1Q5M775 1068 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 PLPP4Q5VZY2 271 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 PDE12Q6L8Q7 609 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 RBM23Q86U06 439 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 BCL7CQ8WUZ0 217 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 TMEM169Q96HH4 297 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 ZFP42Q96MM3 310 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 TCF25Q9BQ70 676 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 C17orf75Q9HAS0 396 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 ENTPD7Q9NQZ7 604 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 BLOC1S4Q9NUP1 217 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 KCND2Q9NZV8 630 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 GIT1Q9Y2X7 761 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 SRPRBQ9Y5M8 271 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 MYH15Q9Y2K3 1946 aa20.39■□□□□ 0.85
TSPAN4-215ENST00000525334 NPHP3-ACAD11A0A0J9YXS1 232 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 CARNS1A5YM72 827 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 K7ERI5 159 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 LINC01565O15544 149 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 LTBRP36941 435 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 SCNN1GP51170 649 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 ARSHQ5FYA8 562 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 NT5DC1Q5TFE4 455 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 EEF1DP3Q658K8 133 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 USP49Q70CQ1 688 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 SPRYD3Q8NCJ5 442 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 IGSF21Q96ID5 467 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 EPSTI1Q96J88 318 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 CLIC6Q96NY7 704 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 FAM193BQ96PV7 902 aaPredicted RBP20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 CCSER1Q9C0I3 900 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 KMT5AQ9NQR1 393 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 ARHGAP28Q9P2N2 729 aa20.38■□□□□ 0.85
TSPAN4-215ENST00000525334 TBX10O75333 385 aa20.37■□□□□ 0.85
TSPAN4-215ENST00000525334 PLS3P13797 630 aa20.37■□□□□ 0.85
TSPAN4-215ENST00000525334 CACNB1Q02641 598 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-215ENST00000525334 DLX2Q07687 328 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-215ENST00000525334 DHX8Q14562 1220 aaKnown RBP20.37■□□□□ 0.85
TSPAN4-215ENST00000525334 SLC39A14Q15043 492 aa20.37■□□□□ 0.85
TSPAN4-215ENST00000525334 ATF7IP2Q5U623 682 aa20.37■□□□□ 0.85
TSPAN4-215ENST00000525334 FOXD4L5Q5VV16 416 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms