RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 OXER1Q8TDS5 423 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 SNX27Q96L92 541 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 HERC2P3Q9BVR0 1158 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 EIF2AQ9BY44 585 aaKnown RBP26.72■■□□□ 1.87
USP47-205ENST00000525257 TM6SF1Q9BZW5 370 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 PDRG1Q9NUG6 133 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 IPPQ9Y573 584 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 ASAP2O43150 1006 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 GAS2O43903 313 aaKnown RBP26.71■■□□□ 1.87
USP47-205ENST00000525257 MYBP10242 640 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 MLH1P40692 756 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 NBL1P41271 181 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 SCRN1Q12765 414 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 COLGALT2Q8IYK4 626 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 CNNM3Q8NE01 707 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 CPB2Q96IY4 423 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 RPS6KC1Q96S38 1066 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 MTRQ99707 1265 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 RNF39Q9H2S5 420 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 KCNK12Q9HB15 430 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 UBN1Q9NPG3 1134 aa26.71■■□□□ 1.87
USP47-205ENST00000525257 SPTBN4Q9H254 2564 aa26.7■■□□□ 1.87
USP47-205ENST00000525257 TBX3O15119 743 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 EPB41L2O43491 1005 aaKnown RBP26.7■■□□□ 1.86
USP47-205ENST00000525257 TSPAN1O60635 241 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 CDKL5O76039 1030 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 ADH1AP07327 375 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 GAD1Q99259 594 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 ZSWIM4Q9H7M6 989 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 FBXL21Q9UKT6 434 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 DUSP12Q9UNI6 340 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 HES2Q9Y543 173 aa26.7■■□□□ 1.86
USP47-205ENST00000525257 PTPRZ1P23471 2315 aaPredicted RBP26.7■■□□□ 1.86
USP47-205ENST00000525257 RIF1Q5UIP0 2472 aaKnown RBP26.7■■□□□ 1.86
USP47-205ENST00000525257 PRR23AA6NEV1 266 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 ARL5CA6NH57 179 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 TEX28O15482 410 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 XBP1P17861 261 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 GLUD2P49448 558 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 SPIRE1Q08AE8 756 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 NOTUMQ6P988 496 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 NAP1L4Q99733 375 aaKnown RBP26.69■■□□□ 1.86
USP47-205ENST00000525257 APOL6Q9BWW8 343 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 XPNPEP1Q9NQW7 623 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 SSX2IPQ9Y2D8 614 aa26.69■■□□□ 1.86
USP47-205ENST00000525257 TDRD15B5MCY1 1934 aaKnown RBP26.69■■□□□ 1.86
USP47-205ENST00000525257 STK36Q9NRP7 1315 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 FAM205CA6NFA0 338 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 F8W810 466 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 N4BP1O75113 896 aaKnown RBP26.68■■□□□ 1.86
USP47-205ENST00000525257 NPR3P17342 541 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 SCNN1GP51170 649 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 PTENP60484 403 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 EARS2Q5JPH6 523 aaKnown RBP26.68■■□□□ 1.86
USP47-205ENST00000525257 FRMD5Q7Z6J6 570 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 TPH2Q8IWU9 490 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 CMASQ8NFW8 434 aaPredicted RBP26.68■■□□□ 1.86
USP47-205ENST00000525257 ZFP42Q96MM3 310 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 MIOSQ9NXC5 875 aa26.68■■□□□ 1.86
USP47-205ENST00000525257 CCDC195A0A1B0GUA6 201 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 INO80B-WBP1J3KQ70 363 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 INPPL1O15357 1258 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 PI15O43692 258 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 GLUD1P00367 558 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 AOC1P19801 751 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 AXLP30530 894 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 GBP2P32456 591 aaPredicted RBP26.67■■□□□ 1.86
USP47-205ENST00000525257 DSC1Q08554 894 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 RNF168Q8IYW5 571 aaPredicted RBP26.67■■□□□ 1.86
USP47-205ENST00000525257 SIX5Q8N196 739 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 CCDC51Q96ER9 411 aa26.67■■□□□ 1.86
USP47-205ENST00000525257 NARSO43776 548 aaKnown RBP26.66■■□□□ 1.86
USP47-205ENST00000525257 RFPL2O75678 378 aa26.66■■□□□ 1.86
USP47-205ENST00000525257 BAG4O95429 457 aaKnown RBP26.66■■□□□ 1.86
USP47-205ENST00000525257 NCBP1Q09161 790 aaKnown RBP26.66■■□□□ 1.86
USP47-205ENST00000525257 MXD4Q14582 209 aaPredicted RBP26.66■■□□□ 1.86
USP47-205ENST00000525257 PCBP1Q15365 356 aaKnown RBP eCLIP26.66■■□□□ 1.86
USP47-205ENST00000525257 KIAA0319Q5VV43 1072 aa26.66■■□□□ 1.86
USP47-205ENST00000525257 ELMSAN1Q6PJG2 1045 aa26.66■■□□□ 1.86
USP47-205ENST00000525257 SLFN12Q8IYM2 578 aa26.66■■□□□ 1.86
USP47-205ENST00000525257 CSRNP2Q9H175 543 aa26.66■■□□□ 1.86
USP47-205ENST00000525257 IGSF9Q9P2J2 1179 aa26.66■■□□□ 1.86
USP47-205ENST00000525257 CLUHO75153 1309 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 FAM186AA6NE01 2351 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 SLITRK3O94933 977 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 EFEMP2O95967 443 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 SPATA31D3P0C874 917 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 MBTD1Q05BQ5 628 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 TFDP1Q14186 410 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 SPATA31D4Q6ZUB0 917 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 ASAP3Q8TDY4 903 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 RSAD2Q8WXG1 361 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 B3GALT6Q96L58 329 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 EIF2AK1Q9BQI3 630 aaKnown RBP26.65■■□□□ 1.86
USP47-205ENST00000525257 TRIM6Q9C030 488 aaPredicted RBP26.65■■□□□ 1.86
USP47-205ENST00000525257 NXF3Q9H4D5 531 aaKnown RBP26.65■■□□□ 1.86
USP47-205ENST00000525257 RXFP1Q9HBX9 757 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 WDR6Q9NNW5 1121 aaKnown RBP26.65■■□□□ 1.86
USP47-205ENST00000525257 DPP7Q9UHL4 492 aa26.65■■□□□ 1.86
USP47-205ENST00000525257 NR1I2O75469 434 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms