RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 DLGAP5Q15398 846 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 TIGD6Q17RP2 521 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 KLHDC7AQ5VTJ3 777 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 ACAD10Q6JQN1 1059 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 IL27RAQ6UWB1 636 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 RSPO2Q6UXX9 243 aaPredicted RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 OTOP1Q7RTM1 612 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 PRPF39Q86UA1 669 aaKnown RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 RPAP2Q8IXW5 612 aaPredicted RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 NGEFQ8N5V2 710 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 PPP1R14CQ8TAE6 165 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 KLHDC4Q8TBB5 520 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 STT3BQ8TCJ2 826 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 RUBCNQ92622 972 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 MUL1Q969V5 352 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 ZNF566Q969W8 418 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 C18orf8Q96DM3 657 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SLC2A13Q96QE2 648 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 PIGSQ96S52 555 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 KCTD10Q9H3F6 313 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 ACAD9Q9H845 621 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 KCND1Q9NSA2 647 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 TMEM160Q9NX00 188 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 HOXC10Q9NYD6 342 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 CGGBP1Q9UFW8 167 aaPredicted RBP4.98□□□□□ -1.61
CD44-213ENST00000525209 CTNNA3Q9UI47 895 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SH3BGRL2Q9UJC5 107 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 RPS6KA6Q9UK32 745 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 PCOLCE2Q9UKZ9 415 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 FAM184BQ9ULE4 1060 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SLC39A10Q9ULF5 831 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 DUSP12Q9UNI6 340 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 STXBP5LQ9Y2K9 1186 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SPO11Q9Y5K1 396 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 SNX8Q9Y5X2 465 aa4.98□□□□□ -1.61
CD44-213ENST00000525209 CNTNAP5Q8WYK1 1306 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 A0A1B0GTH6 734 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 hCG_1807616A0A1W2PRN6 198 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 F8W031 263 aaPredicted RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 RNF225M0QZC1 329 aaPredicted RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 FYB1O15117 783 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 KDM1AO60341 852 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 SRGAP2O75044 1071 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 CLEC3AO75596 197 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 SLC22A3O75751 556 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 DGKIO75912 1065 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ENDOD1O94919 500 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 SRGAP2BP0DMP2 458 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 NR2F1P10589 423 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 RARBP10826 455 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 BCRP11274 1271 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 EEF2P13639 858 aaKnown RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 KRT13P13646 458 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 OSMP13725 252 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ECI1P42126 302 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 FOXO4P98177 505 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 AKAP17AQ02040 695 aaKnown RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 MAP2K1Q02750 393 aaPredicted RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 CYP4F3Q08477 520 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 MRPL28Q13084 256 aaKnown RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 PAK1Q13153 545 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ACVR2BQ13705 512 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 AUHQ13825 339 aaKnown RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 UBAP2LQ14157 1087 aaKnown RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 WTAPQ15007 396 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 INF2Q27J81 1249 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 WSCD2Q2TBF2 565 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ADCK5Q3MIX3 580 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ANKDD1AQ495B1 522 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 VWA3BQ502W6 1294 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 TOR2AQ5JU69 321 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 NAA16Q6N069 864 aaPredicted RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 BTNL9Q6UXG8 535 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 FRMD7Q6ZUT3 714 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 NUP54Q7Z3B4 507 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 KCNK18Q7Z418 384 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 VN1R5Q7Z5H4 357 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 CCDC170Q8IYT3 715 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 PHACTR4Q8IZ21 702 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 C2orf69Q8N8R5 385 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 KREMEN2Q8NCW0 462 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ZNF540Q8NDQ6 660 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ADCY4Q8NFM4 1077 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD44-213ENST00000525209 UTP15Q8TED0 518 aaKnown RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 RIN2Q8WYP3 895 aaPredicted RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 ST8SIA4Q92187 359 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 RILPL2Q969X0 211 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 KIF1BPQ96EK5 621 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ACSBG1Q96GR2 724 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 HEPHQ9BQS7 1158 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 POLR3CQ9BUI4 534 aaPredicted RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 RASSF4Q9H2L5 321 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 FBXL5Q9UKA1 691 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 ARHGAP26Q9UNA1 814 aa4.97□□□□□ -1.61
CD44-213ENST00000525209 EPN1Q9Y6I3 576 aaPredicted RBP4.97□□□□□ -1.61
CD44-213ENST00000525209 RIMBP3CA6NJZ7 1639 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms