RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 A0A0G2JMZ2 1700 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 LRRC37A2A6NM11 1700 aa9.62□□□□□ -0.87
PKP3-202ENST00000524646 CLRN2A0PK11 232 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 GMNCA6NCL1 334 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 TBC1D12O60347 775 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 CHRNB2P17787 502 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 ITGB5P18084 799 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 PTGER2P43116 358 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 GCLMP48507 274 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 SEC24CP53992 1094 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 PMS2P54278 862 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 MAGOHP61326 146 aaKnown RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 GPC5P78333 572 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 DLG4P78352 724 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 GTF2BQ00403 316 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 CYP1B1Q16678 543 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 TKFCQ3LXA3 575 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 FKBP1CQ5VVH2 108 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 PCNX4Q63HM2 1172 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 C6orf89Q6UWU4 347 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 NOP9Q86U38 636 aaKnown RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 FAM71AQ8IYT1 594 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 PRELID2Q8N945 189 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 PRPF38AQ8NAV1 312 aaKnown RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 PROCA1Q8NCQ7 364 aaPredicted RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 PLEKHO2Q8TD55 490 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 C7orf43Q8WVR3 580 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 SHC3Q92529 594 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 KRT35Q92764 455 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 CD101Q93033 1021 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 MAGOHBQ96A72 148 aaKnown RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 PABPC3Q9H361 631 aaKnown RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 ACTR5Q9H9F9 607 aaPredicted RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 FBXO28Q9NVF7 368 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 TMOD4Q9NZQ9 345 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 BCCIPQ9P287 314 aaKnown RBP eCLIP9.61□□□□□ -0.87
PKP3-202ENST00000524646 ZNF219Q9P2Y4 722 aaPredicted RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 CNOT8Q9UFF9 292 aaKnown RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 MTRF1LQ9UGC7 380 aaKnown RBP9.61□□□□□ -0.87
PKP3-202ENST00000524646 GTF3C4Q9UKN8 822 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 EXOC7Q9UPT5 735 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 ATP8A1Q9Y2Q0 1164 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 ALG6Q9Y672 507 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 CAPN7Q9Y6W3 813 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 SSC5DA1L4H1 1573 aa9.61□□□□□ -0.87
PKP3-202ENST00000524646 ASTN2O75129 1339 aaPredicted RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 PASKQ96RG2 1323 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 BRCA1P38398 1863 aaKnown RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 TISP43B9A030 160 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 PLSCR1O15162 318 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 DHX15O43143 795 aaKnown RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 FTLP02792 175 aaPredicted RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 CYP1A2P05177 515 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 GZMAP12544 262 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 COMTP21964 271 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 COPB2P35606 906 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 CAP2P40123 477 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 RPL21P46778 160 aaKnown RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 QARSP47897 775 aaKnown RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 JAK3P52333 1124 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 ENPEPQ07075 957 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 ADCY2Q08462 1091 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 DLGAP5Q15398 846 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 ZYXQ15942 572 aaKnown RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 ZNF746Q6NUN9 644 aaPredicted RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 KCNV1Q6PIU1 500 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 HAUS6Q7Z4H7 955 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 MCF2L2Q86YR7 1114 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 SLC13A5Q86YT5 568 aaPredicted RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 CACNA2D3Q8IZS8 1091 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 ZNF564Q8TBZ8 553 aaPredicted RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 CLEC4DQ8WXI8 215 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 RAPGEF5Q92565 580 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 P3H4Q92791 437 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 TATDN2Q93075 761 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 CENPTQ96BT3 561 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 ZNF653Q96CK0 615 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 C18orf8Q96DM3 657 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 PGM2Q96G03 612 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 KREMEN1Q96MU8 473 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 XPO6Q96QU8 1125 aaKnown RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 PCDHB18PQ96TA0 734 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 TMEM109Q9BVC6 243 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 TMEM117Q9H0C3 514 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 PCIF1Q9H4Z3 704 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 PPANQ9NQ55 473 aaKnown RBP9.6□□□□□ -0.87
PKP3-202ENST00000524646 KCNH7Q9NS40 1196 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 PKD2L1Q9P0L9 805 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 COL20A1Q9P218 1284 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 UVRAGQ9P2Y5 699 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 ZHX2Q9Y6X8 837 aa9.6□□□□□ -0.87
PKP3-202ENST00000524646 CCDC169A6NNP5 214 aa9.59□□□□□ -0.87
PKP3-202ENST00000524646 PODXLO00592 558 aa9.59□□□□□ -0.87
PKP3-202ENST00000524646 NFIBO00712 420 aa9.59□□□□□ -0.87
PKP3-202ENST00000524646 BACH1O14867 736 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms