RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 ITGA4P13612 1032 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 GAP43P17677 238 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 LAG3P18627 525 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 CMA1P23946 247 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 CTNNB1P35222 781 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 GATMP50440 423 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 NCKAP1LP55160 1127 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 E2F4Q16254 413 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 PTPROQ16827 1216 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 DCAF4L1Q3SXM0 396 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 PAN2Q504Q3 1202 aaKnown RBP11.13□□□□□ -0.63
TTC39A-213ENST00000524442 NOMO2Q5JPE7 1267 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 ATF7IP2Q5U623 682 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 AGMOQ6ZNB7 445 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 MYCT1Q8N699 235 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 PDILTQ8N807 584 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 SMG8Q8ND04 991 aaKnown RBP11.13□□□□□ -0.63
TTC39A-213ENST00000524442 URGCPQ8TCY9 931 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 HELQQ8TDG4 1101 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 DDX12PQ92771 950 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 EIF2AQ9BY44 585 aaKnown RBP11.13□□□□□ -0.63
TTC39A-213ENST00000524442 PANK2Q9BZ23 570 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 LMAN2LQ9H0V9 348 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 ST6GALNAC4Q9H4F1 302 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 PDZD7Q9H5P4 517 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 RSAD1Q9HA92 442 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 TYW1Q9NV66 732 aaKnown RBP11.13□□□□□ -0.63
TTC39A-213ENST00000524442 KBTBD4Q9NVX7 518 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 MTUS1Q9ULD2 1270 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 TNFSF13BQ9Y275 285 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 GIT1Q9Y2X7 761 aa11.13□□□□□ -0.63
TTC39A-213ENST00000524442 A0A1W2PQ27 194 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 A0A1W2PQ64 194 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 A0A1W2PQD8 194 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 EPOPA6NHQ4 379 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 MYMKA6NI61 221 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 POLR2DO15514 142 aaKnown RBP11.12□□□□□ -0.63
TTC39A-213ENST00000524442 LPXNO60711 386 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 NPTXRO95502 500 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 LIG1P18858 919 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 IGFBP4P22692 258 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
TTC39A-213ENST00000524442 GPM6BQ13491 265 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 ADGRE1Q14246 886 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 SPOUT1Q5T280 376 aaKnown RBP11.12□□□□□ -0.63
TTC39A-213ENST00000524442 NT5DC1Q5TFE4 455 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 CNNM4Q6P4Q7 775 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 HAUS6Q7Z4H7 955 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 SPRED2Q7Z698 418 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 FAM178BQ8IXR5 827 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 LPPQ93052 612 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 DNAJC19Q96DA6 116 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 ACO2Q99798 780 aaKnown RBP11.12□□□□□ -0.63
TTC39A-213ENST00000524442 CWH43Q9H720 699 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 PTPRHQ9HD43 1115 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 KCNH3Q9ULD8 1083 aa11.12□□□□□ -0.63
TTC39A-213ENST00000524442 FAM237AA0A1B0GTK4 181 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 FRMD3A2A2Y4 597 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 K7ENM7 598 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 RFXAPO00287 272 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 TOM1L1O75674 476 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 PPM1AP35813 382 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 GTF2BQ00403 316 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 UBE3AQ05086 875 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 ALCAMQ13740 583 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 LRRC55Q6ZSA7 311 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 DYMQ7RTS9 669 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 TAS1R3Q7RTX0 852 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 COLGALT1Q8NBJ5 622 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 DHX58Q96C10 678 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 HVCN1Q96D96 273 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 MRPL38Q96DV4 380 aaKnown RBP11.11□□□□□ -0.63
TTC39A-213ENST00000524442 ZNF558Q96NG5 402 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 NXF3Q9H4D5 531 aaKnown RBP11.11□□□□□ -0.63
TTC39A-213ENST00000524442 ZHX3Q9H4I2 956 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 OLFML3Q9NRN5 406 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 TBC1D13Q9NVG8 400 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 MTCH2Q9Y6C9 303 aa11.11□□□□□ -0.63
TTC39A-213ENST00000524442 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 MEIS3P2A8K0S8 358 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 PIGRP01833 764 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 EDN1P05305 212 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 SLFN14P0C7P3 912 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 MCF2P10911 925 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 PFKFB1P16118 471 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 PROZP22891 400 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 ALDH7A1P49419 539 aaKnown RBP11.1□□□□□ -0.63
TTC39A-213ENST00000524442 PLCB3Q01970 1234 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 RNASELQ05823 741 aaKnown RBP11.1□□□□□ -0.63
TTC39A-213ENST00000524442 HERC4Q5GLZ8 1057 aaPredicted RBP11.1□□□□□ -0.63
TTC39A-213ENST00000524442 EEF1DP3Q658K8 133 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 KCNT2Q6UVM3 1135 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 MPZL3Q6UWV2 235 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 ZNF720Q7Z2F6 126 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 CDR2LQ86X02 465 aaPredicted RBP11.1□□□□□ -0.63
TTC39A-213ENST00000524442 CCDC65Q8IXS2 484 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms