RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 C18orf8Q96DM3 657 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 CYFIP2Q96F07 1278 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 RPS6KC1Q96S38 1066 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 TMEM117Q9H0C3 514 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 EPB41L4BQ9H329 900 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 ST6GALNAC4Q9H4F1 302 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 AGO4Q9HCK5 861 aaKnown RBP11.94□□□□□ -0.5
HDAC9-228ENST00000524023 RASAL2Q9UJF2 1139 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 USP20Q9Y2K6 914 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 SNX24Q9Y343 169 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 NFIBO00712 420 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 TBC1D12O60347 775 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 MTA2O94776 668 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 LYPLA2O95372 231 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 APBA3O96018 575 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 NUDT17P0C025 328 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 GZMAP12544 262 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 COMTP21964 271 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 CTNNA2P26232 953 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 CHRNA3P32297 505 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 PLTPP55058 493 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 MESDQ14696 234 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 C6orf89Q6UWU4 347 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 NOP9Q86U38 636 aaKnown RBP11.94□□□□□ -0.5
HDAC9-228ENST00000524023 FAM71AQ8IYT1 594 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 ZDHHC14Q8IZN3 488 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 PRELID2Q8N945 189 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 PSMD1Q99460 953 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 PCYOX1Q9UHG3 505 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 NOCTQ9UK39 431 aaKnown RBP11.94□□□□□ -0.5
HDAC9-228ENST00000524023 UBIAD1Q9Y5Z9 338 aa11.94□□□□□ -0.5
HDAC9-228ENST00000524023 FSBPO95073 299 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 ADRB2P07550 413 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 FNTAP49354 379 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 PMS2P54278 862 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 SNRPFP62306 86 aaKnown RBP11.93□□□□□ -0.5
HDAC9-228ENST00000524023 MRPS9P82933 396 aaKnown RBP11.93□□□□□ -0.5
HDAC9-228ENST00000524023 SPP2Q13103 211 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 FBXO25Q8TCJ0 367 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 MORC4Q8TE76 937 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 CLEC4DQ8WXI8 215 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 RAPGEF5Q92565 580 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 KREMEN1Q96MU8 473 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 GMLQ99445 158 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 SH2D3AQ9BRG2 576 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 PABPC3Q9H361 631 aaKnown RBP11.93□□□□□ -0.5
HDAC9-228ENST00000524023 VEZTQ9HBM0 779 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 GRHL1Q9NZI5 618 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 CHORDC1Q9UHD1 332 aaPredicted RBP11.93□□□□□ -0.5
HDAC9-228ENST00000524023 CAPN7Q9Y6W3 813 aa11.93□□□□□ -0.5
HDAC9-228ENST00000524023 ZNFX1Q9P2E3 1918 aaKnown RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 SLC16A4O15374 487 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 CAND2O75155 1236 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 GGPS1O95749 300 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 SHBGP04278 402 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 YWHABP31946 246 aaKnown RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 MCCD1P59942 119 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 IFT88Q13099 833 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 SEL1L2Q5TEA6 688 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 FBXW10Q5XX13 1052 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 TTC27Q6P3X3 843 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 MMS22LQ6ZRQ5 1243 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 HOOK3Q86VS8 718 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 CD101Q93033 1021 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 WNT8AQ9H1J5 351 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 ASTN2O75129 1339 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 TMEM150BA6NC51 233 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 GOLGA8IPA6NC78 632 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 GOLGA8JA6NMD2 632 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 PODXLO00592 558 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 BACH1O14867 736 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 CYP26A1O43174 497 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 RAD17O75943 681 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 RPL21P46778 160 aaKnown RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 NCKAP1LP55160 1127 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 PEX3P56589 373 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 FMO1Q01740 532 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 MAP2K1Q02750 393 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 RASA3Q14644 834 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 QPCTQ16769 361 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 RNF187Q5TA31 235 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 PCNX4Q63HM2 1172 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 SLC47A2Q86VL8 602 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 MCF2L2Q86YR7 1114 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 CNPY4Q8N129 248 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 PPM1KQ8N3J5 372 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 SHC3Q92529 594 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 SEMA4DQ92854 862 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 TIPINQ9BVW5 301 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 CNOT10Q9H9A5 744 aaKnown RBP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 ACP6Q9NPH0 428 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 GPRC5CQ9NQ84 441 aa11.92□□□□□ -0.5
HDAC9-228ENST00000524023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.92□□□□□ -0.5
HDAC9-228ENST00000524023 DDX20Q9UHI6 824 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms