RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 TMEM39AQ9NV64 488 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 TBX21Q9UL17 535 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 KCNH3Q9ULD8 1083 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 NOD1Q9Y239 953 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 PCDHGA11Q9Y5H2 935 aa9.27□□□□□ -0.93
VPS13B-210ENST00000521932 A0A1B0GVL5 298 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 ARHGEF35A5YM69 484 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 TRIM43BA6NCK2 446 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 GOLGA6L4A6NEF3 574 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 KIAA0355O15063 1070 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 POLR2DO15514 142 aaKnown RBP9.26□□□□□ -0.93
VPS13B-210ENST00000521932 F11P03951 625 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 CKBP12277 381 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 PFKFB1P16118 471 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 CYP11B2P19099 503 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 GUCY2CP25092 1073 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 DNM2P50570 870 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 NDUFA8P51970 172 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 POLGP54098 1239 aaPredicted RBP9.26□□□□□ -0.93
VPS13B-210ENST00000521932 CDC42EP1Q00587 391 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 BFSP2Q13515 415 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 SNW1Q13573 536 aaKnown RBP9.26□□□□□ -0.93
VPS13B-210ENST00000521932 IER5Q5VY09 327 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 RSPH3Q86UC2 560 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 METTL13Q8N6R0 699 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 PDILTQ8N807 584 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 ENGASEQ8NFI3 743 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 RASSF8Q8NHQ8 419 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 DNAJB3Q8WWF6 145 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 MRPS27Q92552 414 aaKnown RBP9.26□□□□□ -0.93
VPS13B-210ENST00000521932 WNT8BQ93098 351 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 TRIM43Q96BQ3 446 aaPredicted RBP9.26□□□□□ -0.93
VPS13B-210ENST00000521932 GBP4Q96PP9 640 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 TIPINQ9BVW5 301 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 GPAMQ9HCL2 828 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 XPNPEP1Q9NQW7 623 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 KBTBD4Q9NVX7 518 aa9.26□□□□□ -0.93
VPS13B-210ENST00000521932 ASAP2O43150 1006 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 GPR32O75388 356 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 PRPF40AO75400 957 aaKnown RBP9.25□□□□□ -0.93
VPS13B-210ENST00000521932 PARNO95453 639 aaKnown RBP9.25□□□□□ -0.93
VPS13B-210ENST00000521932 TIMP1P01033 207 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 SLFN14P0C7P3 912 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 ARL2P36404 184 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 STAT6P42226 847 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 GSK3AP49840 483 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 UBE2HP62256 183 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 POU5F1BQ06416 359 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 DRP2Q13474 957 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 UBAP2LQ14157 1087 aaKnown RBP9.25□□□□□ -0.93
VPS13B-210ENST00000521932 EMC2Q15006 297 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 TLR1Q15399 786 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 ARSHQ5FYA8 562 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 FAM26DQ5JW98 314 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 SV2BQ7L1I2 683 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 ZNF295-AS1Q8N0V1 137 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 FMR1NBQ8N0W7 255 aaPredicted RBP9.25□□□□□ -0.93
VPS13B-210ENST00000521932 LRRC71Q8N4P6 559 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 FSIP1Q8NA03 581 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 MCPH1Q8NEM0 835 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 TCP11Q8WWU5 503 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 DPF3Q92784 378 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 CCDC43Q96MW1 224 aaKnown RBP9.25□□□□□ -0.93
VPS13B-210ENST00000521932 NTPCRQ9BSD7 190 aaKnown RBP9.25□□□□□ -0.93
VPS13B-210ENST00000521932 NOC4LQ9BVI4 516 aaKnown RBP9.25□□□□□ -0.93
VPS13B-210ENST00000521932 TNMDQ9H2S6 317 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 HIPK3Q9H422 1215 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 GOLPH3LQ9H4A5 285 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 SUGCTQ9HAC7 445 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 MAGEF1Q9HAY2 307 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 ATP6V0A4Q9HBG4 840 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 USP25Q9UHP3 1055 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 USP3Q9Y6I4 520 aa9.25□□□□□ -0.93
VPS13B-210ENST00000521932 KAT6AQ92794 2004 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 USO1O60763 962 aaKnown RBP9.24□□□□□ -0.93
VPS13B-210ENST00000521932 GADD45BO75293 160 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-210ENST00000521932 ARHGEF15O94989 841 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 ZNF202O95125 648 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 CHRNA1P02708 482 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 IQCF3P0C7M6 154 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 SKIP12755 728 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 ITGB8P26012 769 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 THPOP40225 353 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 SYKP43405 635 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 CLCN3P51790 818 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 AMPD3Q01432 767 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 MGAT3Q09327 533 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 GIT2Q14161 759 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 MXD4Q14582 209 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-210ENST00000521932 GPNMBQ14956 572 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 LONRF3Q496Y0 759 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 ZNF618Q5T7W0 954 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 TMEM214Q6NUQ4 689 aaKnown RBP9.24□□□□□ -0.93
VPS13B-210ENST00000521932 CNNM4Q6P4Q7 775 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 LYPD4Q6UWN0 246 aa9.24□□□□□ -0.93
VPS13B-210ENST00000521932 ELOA2Q8IYF1 753 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-210ENST00000521932 C7orf61Q8IZ16 206 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms