RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 NFKBIZQ9BYH8 718 aa21.84■■□□□ 1.09
PABPC1-215ENST00000520804 CSRNP2Q9H175 543 aa21.84■■□□□ 1.09
PABPC1-215ENST00000520804 TMEM60Q9H2L4 133 aa21.84■■□□□ 1.09
PABPC1-215ENST00000520804 RNF39Q9H2S5 420 aa21.84■■□□□ 1.09
PABPC1-215ENST00000520804 POTEMA6NI47 508 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 LILRB3O75022 631 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 SEC24BO95487 1268 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 WEE2P0C1S8 567 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 KIAA1841Q6NSI8 718 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 KANK3Q6NY19 840 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 SUGP1Q8IWZ8 645 aaKnown RBP21.83■■□□□ 1.09
PABPC1-215ENST00000520804 KLHL5Q96PQ7 755 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 GAD1Q99259 594 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 EMILIN2Q9BXX0 1053 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 HES2Q9Y543 173 aa21.83■■□□□ 1.09
PABPC1-215ENST00000520804 A0A087WWV3 80 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 ARL5CA6NH57 179 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 C2CD4DB7Z1M9 353 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 SSBP05455 408 aaKnown RBP eCLIP21.82■■□□□ 1.08
PABPC1-215ENST00000520804 SPATA31C1P0DKV0 1188 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 ARF4P18085 180 aaPredicted RBP21.82■■□□□ 1.08
PABPC1-215ENST00000520804 MLH1P40692 756 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 SAFBQ15424 915 aaKnown RBP eCLIP21.82■■□□□ 1.08
PABPC1-215ENST00000520804 ATAT1Q5SQI0 421 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 ZBTB33Q86T24 672 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 CABP7Q86V35 215 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 COLGALT2Q8IYK4 626 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 FBXL6Q8N531 539 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 POLR3FQ9H1D9 316 aaPredicted RBP21.82■■□□□ 1.08
PABPC1-215ENST00000520804 MARCH5Q9NX47 278 aa21.82■■□□□ 1.08
PABPC1-215ENST00000520804 SOD2P04179 222 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 CNPP09543 421 aaKnown RBP21.81■■□□□ 1.08
PABPC1-215ENST00000520804 ATP2B1P20020 1258 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 KLRC2P26717 231 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 MCM7P33993 719 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 GUCY1B3Q02153 619 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 DSC1Q08554 894 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 ALYREFQ86V81 257 aaKnown RBP21.81■■□□□ 1.08
PABPC1-215ENST00000520804 KREMEN2Q8NCW0 462 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 TRIM6Q9C030 488 aaPredicted RBP21.81■■□□□ 1.08
PABPC1-215ENST00000520804 SFXN1Q9H9B4 322 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 TUFT1Q9NNX1 390 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 MRPL17Q9NRX2 175 aaKnown RBP21.81■■□□□ 1.08
PABPC1-215ENST00000520804 MIOSQ9NXC5 875 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 LIMCH1Q9UPQ0 1083 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 GIT1Q9Y2X7 761 aa21.81■■□□□ 1.08
PABPC1-215ENST00000520804 PRG3Q9Y2Y8 225 aaPredicted RBP21.81■■□□□ 1.08
PABPC1-215ENST00000520804 B4GALT5O43286 388 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 USO1O60763 962 aaKnown RBP21.8■■□□□ 1.08
PABPC1-215ENST00000520804 OR1G1P47890 313 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 CLCN4P51793 760 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 IER5LQ5T953 404 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 TMC5Q6UXY8 1006 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 CATSPER3Q86XQ3 398 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 HACE1Q8IYU2 909 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 ZFP42Q96MM3 310 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 HERC2P3Q9BVR0 1158 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 APOL6Q9BWW8 343 aa21.8■■□□□ 1.08
PABPC1-215ENST00000520804 NXF3Q9H4D5 531 aaKnown RBP21.8■■□□□ 1.08
PABPC1-215ENST00000520804 DBR1Q9UK59 544 aaKnown RBP21.8■■□□□ 1.08
PABPC1-215ENST00000520804 MED24O75448 989 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 EFEMP2O95967 443 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 URODP06132 367 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 SCNN1GP51170 649 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 SLC27A1Q6PCB7 646 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 MAEAQ7L5Y9 396 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 CCDC83Q8IWF9 413 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 RNF168Q8IYW5 571 aaPredicted RBP21.79■■□□□ 1.08
PABPC1-215ENST00000520804 ZDHHC14Q8IZN3 488 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 TDRD5Q8NAT2 981 aaKnown RBP21.79■■□□□ 1.08
PABPC1-215ENST00000520804 PRSS33Q8NF86 280 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 FEZF2Q8TBJ5 459 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 C8orf76Q96K31 380 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 LLPHQ9BRT6 129 aaKnown RBP21.79■■□□□ 1.08
PABPC1-215ENST00000520804 GPRC5CQ9NQ84 441 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 SORCS3Q9UPU3 1222 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 USTQ9Y2C2 406 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 SSX2IPQ9Y2D8 614 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 WDFY4Q6ZS81 3184 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 KMT2EQ8IZD2 1858 aa21.79■■□□□ 1.08
PABPC1-215ENST00000520804 A0A1B0GUA9 196 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 ORC2Q13416 577 aaPredicted RBP21.78■■□□□ 1.08
PABPC1-215ENST00000520804 MTMR3Q13615 1198 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 TAS1R1Q7RTX1 841 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 GPR149Q86SP6 731 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 CDR2LQ86X02 465 aaPredicted RBP21.78■■□□□ 1.08
PABPC1-215ENST00000520804 UBALD2Q8IYN6 164 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 GSTCDQ8NEC7 633 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 MCPH1Q8NEM0 835 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 NACC1Q96RE7 527 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 RPS6KC1Q96S38 1066 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 PRRX2Q99811 253 aa21.78■■□□□ 1.08
PABPC1-215ENST00000520804 POLR3CQ9BUI4 534 aaPredicted RBP21.78■■□□□ 1.08
PABPC1-215ENST00000520804 TDRD15B5MCY1 1934 aaKnown RBP21.78■■□□□ 1.08
PABPC1-215ENST00000520804 DENND4AQ7Z401 1863 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 LRRIQ4A6NIV6 560 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 SPDYE4A6NLX3 237 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 C2CD2LO14523 706 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 NR1I2O75469 434 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 NPTXRO95502 500 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms