RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 SLC45A1Q9Y2W3 748 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 PCDHB4Q9Y5E5 795 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 PCDHA1Q9Y5I3 950 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 AQP12BA6NM10 295 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 FADS2P1A8MWK0 482 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 DHX15O43143 795 aaKnown RBP4.28□□□□□ -1.72
SREK1-208ENST00000520580 CEACAM5P06731 702 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 ENDOUP21128 410 aaKnown RBP4.28□□□□□ -1.72
SREK1-208ENST00000520580 EEF1GP26641 437 aaKnown RBP4.28□□□□□ -1.72
SREK1-208ENST00000520580 ROM1Q03395 351 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 SEPT2Q15019 361 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 KHDC1Q4VXA5 237 aaKnown RBP4.28□□□□□ -1.72
SREK1-208ENST00000520580 VPS53Q5VIR6 699 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 C16orf54Q6UWD8 224 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 TBC1D1Q86TI0 1168 aaPredicted RBP4.28□□□□□ -1.72
SREK1-208ENST00000520580 SLCO6A1Q86UG4 719 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 FAM129CQ86XR2 697 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 PLD6Q8N2A8 252 aaKnown RBP4.28□□□□□ -1.72
SREK1-208ENST00000520580 OR10H5Q8NGA6 315 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 RPGRQ92834 1020 aaKnown RBP4.28□□□□□ -1.72
SREK1-208ENST00000520580 CLPTM1LQ96KA5 538 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 RMDN3Q96TC7 470 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 NOL10Q9BSC4 688 aaKnown RBP4.28□□□□□ -1.72
SREK1-208ENST00000520580 CNTD2Q9H8S5 307 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 SLC39A2Q9NP94 309 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 PALD1Q9ULE6 856 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 ASAP1Q9ULH1 1129 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 NUB1Q9Y5A7 615 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 PCDHB6Q9Y5E3 794 aa4.28□□□□□ -1.72
SREK1-208ENST00000520580 IPO5O00410 1097 aaKnown RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 NFIBO00712 420 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 SGSM2O43147 1006 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 OPHN1O60890 802 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 NPR1P16066 1061 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 HK3P52790 923 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 NKX6-1P78426 367 aaPredicted RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 PDE1CQ14123 709 aaPredicted RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 ZACNQ401N2 412 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 KHDC1LQ5JSQ8 128 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 AGAP9Q5VTM2 703 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 RRAGBQ5VZM2 374 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 LRSAM1Q6UWE0 723 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 TMC6Q7Z403 805 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 CCHCR1Q8TD31 782 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 BRI3BPQ8WY22 251 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 IRF7Q92985 503 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 MAP6Q96JE9 813 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 FAM167BQ9BTA0 163 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 UNKQ9C0B0 810 aaKnown RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 WNT8AQ9H1J5 351 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 GREM2Q9H772 168 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 TDP1Q9NUW8 608 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 BTBD7Q9P203 1132 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 ARHGAP28Q9P2N2 729 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 RBPJLQ9UBG7 517 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 SCOCQ9UIL1 159 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 AFG3L2Q9Y4W6 797 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 ASB1Q9Y576 335 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 A0A1W2PPC4 97 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 MYO1FO00160 1098 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 ARHGAP6O43182 974 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 FRS3O43559 492 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 TADA3O75528 432 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 TNFRSF6BO95407 300 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 AOAHP28039 575 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 ADSLP30566 484 aaPredicted RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 THBS2P35442 1172 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 TUBP50607 506 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 TERF1P54274 439 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 EIF5P55010 431 aaKnown RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 RPS16P62249 146 aaKnown RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 POU5F1Q01860 360 aaKnown RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 EMC4Q5J8M3 183 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 CCDC30Q5VVM6 783 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 ICE2Q659A1 982 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 LIN54Q6MZP7 749 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 KANSL1Q7Z3B3 1105 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 CDYL2Q8N8U2 506 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 C3orf20Q8ND61 904 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 NUP43Q8NFH3 380 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 SLC16A10Q8TF71 515 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 TRAPPC12Q8WVT3 735 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 USP13Q92995 863 aaPredicted RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 LRRC46Q96FV0 321 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 P2RX7Q99572 595 aaKnown RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 BARD1Q99728 777 aaKnown RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.27□□□□□ -1.73
SREK1-208ENST00000520580 SLC39A10Q9ULF5 831 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 MKL2Q9ULH7 1088 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 MAN2B2Q9Y2E5 1009 aa4.27□□□□□ -1.73
SREK1-208ENST00000520580 CFAP20Q9Y6A4 193 aaKnown RBP4.27□□□□□ -1.73
SREK1-208ENST00000520580 TCRBV5S2A0A599 114 aa4.26□□□□□ -1.73
SREK1-208ENST00000520580 PLA2G6O60733 806 aa4.26□□□□□ -1.73
SREK1-208ENST00000520580 GFPT2O94808 682 aa4.26□□□□□ -1.73
SREK1-208ENST00000520580 PRKCAP17252 672 aa4.26□□□□□ -1.73
SREK1-208ENST00000520580 PTMSP20962 102 aa4.26□□□□□ -1.73
SREK1-208ENST00000520580 HERVK_113P62684 666 aa4.26□□□□□ -1.73
SREK1-208ENST00000520580 CREMQ03060 361 aa4.26□□□□□ -1.73
SREK1-208ENST00000520580 MVKQ03426 396 aa4.26□□□□□ -1.73
SREK1-208ENST00000520580 MGAT5Q09328 741 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms